Literature DB >> 23108593

Cationic membrane peptides: atomic-level insight of structure-activity relationships from solid-state NMR.

Yongchao Su1, Shenhui Li, Mei Hong.   

Abstract

Many membrane-active peptides, such as cationic cell-penetrating peptides (CPPs) and antimicrobial peptides (AMPs), conduct their biological functions by interacting with the cell membrane. The interactions of charged residues with lipids and water facilitate membrane insertion, translocation or disruption of these highly hydrophobic species. In this review, we will summarize high-resolution structural and dynamic findings towards the understanding of the structure-activity relationship of lipid membrane-bound CPPs and AMPs, as examples of the current development of solid-state NMR (SSNMR) techniques for studying membrane peptides. We will present the most recent atomic-resolution structure of the guanidinium-phosphate complex, as constrained from experimentally measured site-specific distances. These SSNMR results will be valuable specifically for understanding the intracellular translocation pathway of CPPs and antimicrobial mechanism of AMPs, and more generally broaden our insight into how cationic macromolecules interact with and cross the lipid membrane.

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Year:  2012        PMID: 23108593      PMCID: PMC3570695          DOI: 10.1007/s00726-012-1421-9

Source DB:  PubMed          Journal:  Amino Acids        ISSN: 0939-4451            Impact factor:   3.520


  105 in total

Review 1.  The structure, dynamics and orientation of antimicrobial peptides in membranes by multidimensional solid-state NMR spectroscopy.

Authors:  B Bechinger
Journal:  Biochim Biophys Acta       Date:  1999-12-15

Review 2.  Oligomeric structure, dynamics, and orientation of membrane proteins from solid-state NMR.

Authors:  Mei Hong
Journal:  Structure       Date:  2006-12       Impact factor: 5.006

Review 3.  The design of guanidinium-rich transporters and their internalization mechanisms.

Authors:  Paul A Wender; Wesley C Galliher; Elena A Goun; Lisa R Jones; Thomas H Pillow
Journal:  Adv Drug Deliv Rev       Date:  2007-11-09       Impact factor: 15.470

4.  Solution structure and model membrane interactions of temporins-SH, antimicrobial peptides from amphibian skin. A NMR spectroscopy and differential scanning calorimetry study.

Authors:  Feten Abbassi; Cécile Galanth; Mohamed Amiche; Kazuko Saito; Christophe Piesse; Loussiné Zargarian; Khaled Hani; Pierre Nicolas; Olivier Lequin; Ali Ladram
Journal:  Biochemistry       Date:  2008-09-17       Impact factor: 3.162

5.  Basis for selectivity of cationic antimicrobial peptides for bacterial versus mammalian membranes.

Authors:  Evgenia Glukhov; Margareta Stark; Lori L Burrows; Charles M Deber
Journal:  J Biol Chem       Date:  2005-07-25       Impact factor: 5.157

6.  Conformational disorder of membrane peptides investigated from solid-state NMR line widths and line shapes.

Authors:  Yongchao Su; Mei Hong
Journal:  J Phys Chem B       Date:  2011-08-18       Impact factor: 2.991

Review 7.  Solid-state NMR studies of amyloid fibril structure.

Authors:  Robert Tycko
Journal:  Annu Rev Phys Chem       Date:  2011       Impact factor: 12.703

8.  Solid-state NMR investigation of the selective perturbation of lipid bilayers by the cyclic antimicrobial peptide RTD-1.

Authors:  Jarrod J Buffy; Melissa J McCormick; Sungsool Wi; Alan Waring; Robert I Lehrer; Mei Hong
Journal:  Biochemistry       Date:  2004-08-03       Impact factor: 3.162

9.  Arginine dynamics in a membrane-bound cationic beta-hairpin peptide from solid-state NMR.

Authors:  Ming Tang; Alan J Waring; Mei Hong
Journal:  Chembiochem       Date:  2008-06-16       Impact factor: 3.164

10.  Assessing atomistic and coarse-grained force fields for protein-lipid interactions: the formidable challenge of an ionizable side chain in a membrane.

Authors:  Igor Vorobyov; Libo Li; Toby W Allen
Journal:  J Phys Chem B       Date:  2008-07-18       Impact factor: 2.991

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  13 in total

1.  Oligomeric Structure and Three-Dimensional Fold of the HIV gp41 Membrane-Proximal External Region and Transmembrane Domain in Phospholipid Bilayers.

Authors:  Byungsu Kwon; Myungwoon Lee; Alan J Waring; Mei Hong
Journal:  J Am Chem Soc       Date:  2018-06-22       Impact factor: 15.419

2.  Interaction of Scots Pine Defensin with Model Membrane by Coarse-Grained Molecular Dynamics.

Authors:  Elena Ermakova; Yuriy Zuev
Journal:  J Membr Biol       Date:  2017-02-18       Impact factor: 1.843

3.  Charge Distribution Fine-Tunes the Translocation of α-Helical Amphipathic Peptides across Membranes.

Authors:  Francis D O Ablan; B Logan Spaller; Kaitlyn I Abdo; Paulo F Almeida
Journal:  Biophys J       Date:  2016-10-18       Impact factor: 4.033

4.  Identification and elucidation of proline-rich antimicrobial peptides with enhanced potency and delivery.

Authors:  Pin-Kuang Lai; Daniel T Tresnak; Benjamin J Hackel
Journal:  Biotechnol Bioeng       Date:  2019-07-21       Impact factor: 4.530

5.  Cm-p5: an antifungal hydrophilic peptide derived from the coastal mollusk Cenchritis muricatus (Gastropoda: Littorinidae).

Authors:  Carlos López-Abarrategui; Christine McBeth; Santi M Mandal; Zhenyu J Sun; Gregory Heffron; Annia Alba-Menéndez; Ludovico Migliolo; Osvaldo Reyes-Acosta; Mónica García-Villarino; Diego O Nolasco; Rosana Falcão; Mariana D Cherobim; Simoni C Dias; Wolfgang Brandt; Ludger Wessjohann; Michael Starnbach; Octavio L Franco; Anselmo J Otero-González
Journal:  FASEB J       Date:  2015-04-28       Impact factor: 5.191

6.  Action of the multifunctional peptide BP100 on native biomembranes examined by solid-state NMR.

Authors:  Julia Misiewicz; Sergii Afonin; Stephan L Grage; Jonas van den Berg; Erik Strandberg; Parvesh Wadhwani; Anne S Ulrich
Journal:  J Biomol NMR       Date:  2015-01-24       Impact factor: 2.835

7.  Cardiolipin interaction with subunit c of ATP synthase: solid-state NMR characterization.

Authors:  Ségolène Laage; Yisong Tao; Ann E McDermott
Journal:  Biochim Biophys Acta       Date:  2014-08-25

Review 8.  From Angstroms to Nanometers: Measuring Interatomic Distances by Solid-State NMR.

Authors:  Alexander A Shcherbakov; João Medeiros-Silva; Nhi Tran; Martin D Gelenter; Mei Hong
Journal:  Chem Rev       Date:  2021-10-25       Impact factor: 72.087

9.  Rapid isolation of extracellular vesicles from cell culture and biological fluids using a synthetic peptide with specific affinity for heat shock proteins.

Authors:  Anirban Ghosh; Michelle Davey; Ian C Chute; Steven G Griffiths; Scott Lewis; Simi Chacko; David Barnett; Nicolas Crapoulet; Sébastien Fournier; Andrew Joy; Michelle C Caissie; Amanda D Ferguson; Melissa Daigle; M Vicki Meli; Stephen M Lewis; Rodney J Ouellette
Journal:  PLoS One       Date:  2014-10-17       Impact factor: 3.240

10.  Preliminary Characterization of NP339, a Novel Polyarginine Peptide with Broad Antifungal Activity.

Authors:  Vanessa Duncan; Daniel Smith; Laura Simpson; Emma Lovie; Laura Katvars; Leon Berge; Jennifer Robertson; Shane Smith; Carol Munro; Derry Mercer; Deborah O'Neil
Journal:  Antimicrob Agents Chemother       Date:  2021-07-16       Impact factor: 5.191

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