Literature DB >> 18433727

Regulation of mammalian microRNA processing and function by cellular signaling and subcellular localization.

Neil R Smalheiser1.   

Abstract

For many microRNAs, in many normal tissues and in cancer cells, the cellular levels of mature microRNAs are not simply determined by transcription of microRNA genes. This mini-review will discuss how microRNA biogenesis and function can be regulated by various nuclear and cytoplasmic processing events, including emerging evidence that microRNA pathway components can be selectively regulated by control of their subcellular localization and by modifications that occur during dynamic cellular signaling. Finally, I will briefly summarize studies of microRNAs in synaptic fractions of adult mouse forebrain, which may serve as a model for other cell types as well.

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Year:  2008        PMID： 18433727      PMCID： PMC2628772          DOI： 10.1016/j.bbagrm.2008.03.009

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  55 in total

1.  Phosphorylation of p68 RNA helicase regulates RNA binding by the C-terminal domain of the protein.

Authors:  Liuqing Yang; Jenny Yang; Youliang Huang; Zhi Ren Liu
Journal:  Biochem Biophys Res Commun       Date:  2004-02-06       Impact factor: 3.575

Review 2.  The neuronal microRNA system.

Authors:  Kenneth S Kosik
Journal:  Nat Rev Neurosci       Date:  2006-12       Impact factor: 34.870

3.  In vitro analysis of microRNA processing using recombinant Dicer and cytoplasmic extracts of HeLa cells.

Authors:  Philipp J F Leuschner; Javier Martinez
Journal:  Methods       Date:  2007-10       Impact factor: 3.608

Review 4.  microRNA functions.

Authors:  Natascha Bushati; Stephen M Cohen
Journal:  Annu Rev Cell Dev Biol       Date:  2007       Impact factor: 13.827

5.  P68 RNA helicase unwinds the human let-7 microRNA precursor duplex and is required for let-7-directed silencing of gene expression.

Authors:  David W Salzman; Jonathan Shubert-Coleman; Henry Furneaux
Journal:  J Biol Chem       Date:  2007-08-27       Impact factor: 5.157

Review 6.  Differential translation and fragile X syndrome.

Authors:  P W Vanderklish; G M Edelman
Journal:  Genes Brain Behav       Date:  2005-08       Impact factor: 3.449

Review 7.  Identification of messenger RNAs and microRNAs associated with fragile X mental retardation protein.

Authors:  Ranhui Duan; Peng Jin
Journal:  Methods Mol Biol       Date:  2006

8.  A mammalian microRNA expression atlas based on small RNA library sequencing.

Authors:  Pablo Landgraf; Mirabela Rusu; Robert Sheridan; Alain Sewer; Nicola Iovino; Alexei Aravin; Sébastien Pfeffer; Amanda Rice; Alice O Kamphorst; Markus Landthaler; Carolina Lin; Nicholas D Socci; Leandro Hermida; Valerio Fulci; Sabina Chiaretti; Robin Foà; Julia Schliwka; Uta Fuchs; Astrid Novosel; Roman-Ulrich Müller; Bernhard Schermer; Ute Bissels; Jason Inman; Quang Phan; Minchen Chien; David B Weir; Ruchi Choksi; Gabriella De Vita; Daniela Frezzetti; Hans-Ingo Trompeter; Veit Hornung; Grace Teng; Gunther Hartmann; Miklos Palkovits; Roberto Di Lauro; Peter Wernet; Giuseppe Macino; Charles E Rogler; James W Nagle; Jingyue Ju; F Nina Papavasiliou; Thomas Benzing; Peter Lichter; Wayne Tam; Michael J Brownstein; Andreas Bosio; Arndt Borkhardt; James J Russo; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

9.  Dephosphorylation of survival motor neurons (SMN) by PPM1G/PP2Cgamma governs Cajal body localization and stability of the SMN complex.

Authors:  Sebastian Petri; Matthias Grimmler; Sabine Over; Utz Fischer; Oliver J Gruss
Journal:  J Cell Biol       Date:  2007-11-05       Impact factor: 10.539

10.  Comparison of the contributions of the nuclear and cytoplasmic compartments to global gene expression in human cells.

Authors:  Roger A Barthelson; Georgina M Lambert; Cheryl Vanier; Ronald M Lynch; David W Galbraith
Journal:  BMC Genomics       Date:  2007-09-25       Impact factor: 3.969
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  17 in total

1.  Individual microRNAs (miRNAs) display distinct mRNA targeting "rules".

Authors:  Wang-Xia Wang; Bernard R Wilfred; Kevin Xie; Mary H Jennings; Yanling Hu Hu; Arnold J Stromberg; Peter T Nelson
Journal:  RNA Biol       Date:  2010 May-Jun       Impact factor: 4.652

Review 2.  High-throughput experimental studies to identify miRNA targets directly, with special focus on the mammalian brain.

Authors:  Peter T Nelson; Marianthi Kiriakidou; Zissimos Mourelatos; Grace S Tan; Mary H Jennings; Kevin Xie; Wang-Xia Wang
Journal:  Brain Res       Date:  2010-04-07       Impact factor: 3.252

3.  Arrowsmith two-node search interface: a tutorial on finding meaningful links between two disparate sets of articles in MEDLINE.

Authors:  Neil R Smalheiser; Vetle I Torvik; Wei Zhou
Journal:  Comput Methods Programs Biomed       Date:  2009-01-30       Impact factor: 5.428

4.  The Story of SPATA2 (Spermatogenesis-Associated Protein 2): From Sertoli Cells to Pancreatic Beta-Cells.

Authors:  Claudio Maran; Evelyne Tassone; Valentina Masola; Maurizio Onisto
Journal:  Curr Genomics       Date:  2009-08       Impact factor: 2.236

Review 5.  microRNA regulation of synaptic plasticity.

Authors:  Neil R Smalheiser; Giovanni Lugli
Journal:  Neuromolecular Med       Date:  2009-05-21       Impact factor: 3.843

Review 6.  In situ hybridization is a necessary experimental complement to microRNA (miRNA) expression profiling in the human brain.

Authors:  Peter T Nelson; Bernard R Wilfred
Journal:  Neurosci Lett       Date:  2009-04-23       Impact factor: 3.046

Review 7.  MicroRNA biogenesis: there's more than one way to skin a cat.

Authors:  Michael Faller; Feng Guo
Journal:  Biochim Biophys Acta       Date:  2008-08-20

8.  A membrane fusion protein, Ykt6, regulates epithelial cell migration via microRNA-mediated suppression of Junctional Adhesion Molecule A.

Authors:  Nayden G Naydenov; Supriya Joshi; Alex Feygin; Siddharth Saini; Larisa Litovchick; Andrei I Ivanov
Journal:  Cell Cycle       Date:  2018-08-04       Impact factor: 4.534

9.  Distinct MicroRNA Subcellular Size and Expression Patterns in Human Cancer Cells.

Authors:  Beibei Chen; Bo Zhang; Huaxia Luo; Jiao Yuan; Geir Skogerbø; Runsheng Chen
Journal:  Int J Cell Biol       Date:  2012-02-12

10.  Uracils at nucleotide position 9-11 are required for the rapid turnover of miR-29 family.

Authors:  Zhuo Zhang; Jun Zou; Guo-Kun Wang; Jun-Tao Zhang; Shuang Huang; Yong-Wen Qin; Qing Jing
Journal:  Nucleic Acids Res       Date:  2011-02-01       Impact factor: 16.971
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