Literature DB >> 18384147

Refinement of noncalorimetric determination of the change in heat capacity, DeltaC(p), of protein unfolding and validation across a wide temperature range.

Deepika Talla-Singh1, Wesley E Stites.   

Abstract

The change in heat capacity, DeltaC(p), on protein unfolding has been usually determined by calorimetry. A noncalorimetric method which employs the Gibbs-Helmholtz relationship to determine DeltaC(p) has seen some use. Generally, in this method the free energy change on unfolding of the protein is determined at a variety of temperatures and the temperature at which DeltaG is zero, T(m), and change in enthalpy at T(m) are determined by thermal denaturation and DeltaC(p) is then calculated using the Gibbs-Helmholtz equation. We show here that an abbreviated method with stability determinations at just two temperatures gives values of DeltaC(p) consistent with values from free energy change on unfolding determination at a much wider range of temperatures. Further, even the free energy change on unfolding from a single solvent denaturation at the proper temperature, when coupled with the melting temperature, T(m), and the van't Hoff enthalpy, DeltaH(vH), from a thermal denaturation, gives a reasonable estimate of DeltaC(p), albeit with greater uncertainty than solvent denaturations at two temperatures. We also find that nonlinear regression of the Gibbs-Helmholtz equation as a function of stability and temperature while simultaneously fitting DeltaC(p), T(m), and DeltaH(vH) gives values for the last two parameters that are in excellent agreement with experimental values. (c) 2008 Wiley-Liss, Inc.

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Year:  2008        PMID: 18384147      PMCID: PMC2630543          DOI: 10.1002/prot.22016

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  23 in total

1.  Heat capacity change for ribonuclease A folding.

Authors:  C N Pace; G R Grimsley; S T Thomas; G I Makhatadze
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

2.  Application of automated methods for determination of protein conformational stability.

Authors:  J M Schwehm; W E Stites
Journal:  Methods Enzymol       Date:  1998       Impact factor: 1.600

3.  Monitoring the sizes of denatured ensembles of staphylococcal nuclease proteins: implications regarding m values, intermediates, and thermodynamics.

Authors:  I V Baskakov; D W Bolen
Journal:  Biochemistry       Date:  1998-12-22       Impact factor: 3.162

4.  Studies of the unfolding of an unstable mutant of staphylococcal nuclease: evidence for low temperature unfolding and compactness of the high temperature unfolded state.

Authors:  M R Eftink; G D Ramsay
Journal:  Proteins       Date:  1997-06

Review 5.  Thermodynamics of denaturation of staphylococcal nuclease mutants: an intermediate state in protein folding.

Authors:  J H Carra; P L Privalov
Journal:  FASEB J       Date:  1996-01       Impact factor: 5.191

6.  Instrumentation for automated determination of protein stability.

Authors:  W E Stites; M P Byrne; J Aviv; M Kaplan; P M Curtis
Journal:  Anal Biochem       Date:  1995-05-01       Impact factor: 3.365

7.  Thermodynamics of staphylococcal nuclease denaturation. I. The acid-denatured state.

Authors:  J H Carra; E A Anderson; P L Privalov
Journal:  Protein Sci       Date:  1994-06       Impact factor: 6.725

8.  The peculiar nature of the guanidine hydrochloride-induced two-state denaturation of staphylococcal nuclease: a calorimetric study.

Authors:  M Yang; D Liu; D W Bolen
Journal:  Biochemistry       Date:  1999-08-24       Impact factor: 3.162

9.  Effects of proline mutations on the folding of staphylococcal nuclease.

Authors:  K Maki; T Ikura; T Hayano; N Takahashi; K Kuwajima
Journal:  Biochemistry       Date:  1999-02-16       Impact factor: 3.162

10.  Incorporation of tryptophan analogues into staphylococcal nuclease: stability toward thermal and guanidine-HCl induced unfolding.

Authors:  C Y Wong; M R Eftink
Journal:  Biochemistry       Date:  1998-06-23       Impact factor: 3.162

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  6 in total

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Authors:  Christos S Karamitros; Manfred Konrad
Journal:  J Biol Chem       Date:  2014-03-22       Impact factor: 5.157

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Authors:  Daniel G Isom; Eyal Vardy; Terrence G Oas; Homme W Hellinga
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Review 3.  Non-Arrhenius protein aggregation.

Authors:  Wei Wang; Christopher J Roberts
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5.  Effects of ligand binding on the stability of aldo-keto reductases: Implications for stabilizer or destabilizer chaperones.

Authors:  Aurangazeb Kabir; Ryo P Honda; Yuji O Kamatari; Satoshi Endo; Mayuko Fukuoka; Kazuo Kuwata
Journal:  Protein Sci       Date:  2016-09-19       Impact factor: 6.725

6.  Zinc shapes the folding landscape of p53 and establishes a pathway for reactivating structurally diverse cancer mutants.

Authors:  Adam R Blanden; Xin Yu; Darren R Carpizo; Stewart N Loh; Alan J Blayney; Christopher Demas; Jeung-Hoi Ha; Yue Liu; Tracy Withers
Journal:  Elife       Date:  2020-12-02       Impact factor: 8.713

  6 in total

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