Literature DB >> 18337249

RNaseE and RNA helicase B play central roles in the cytoskeletal organization of the RNA degradosome.

Aziz Taghbalout1, Lawrence Rothfield.   

Abstract

The RNA degradosome of Escherichia coli is a multiprotein complex that plays an essential role in normal RNA processing and decay. It was recently shown that the major degradosome constituents are organized in a coiled cytoskeletal-like structure that extends along the length of the cell. Here we show that the endoribonuclease E (RNaseE) and RNA helicase B (RhlB) components of the degradosome can each independently form coiled structures in the absence of the other degradosome proteins. In contrast, the cytoskeletal organization of the other degradosome proteins required the presence of the RNaseE or RhlB coiled elements. Although the RNaseE and RhlB structures were equally competent to support the helical organization of polynucleotide phosphorylase, the cytoskeletal-like organization of enolase occurred only in the presence of the RNaseE coiled structure. The results indicate that the RNA degradosome proteins are components of the bacterial cytoskeleton rather than existing as randomly distributed multiprotein complexes within the cell and suggest a model for the cellular organization of the components within the helical degradosomal structure.

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Year:  2008        PMID: 18337249      PMCID: PMC2376217          DOI: 10.1074/jbc.M709118200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  34 in total

1.  Dynamic assembly of MinD on phospholipid vesicles regulated by ATP and MinE.

Authors:  Zonglin Hu; Edward P Gogol; Joe Lutkenhaus
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

2.  Two independent spiral structures control cell shape in Caulobacter.

Authors:  Natalie A Dye; Zachary Pincus; Julie A Theriot; Lucy Shapiro; Zemer Gitai
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-12       Impact factor: 11.205

Review 3.  The bacterial cytoskeleton.

Authors:  Yu-Ling Shih; Lawrence Rothfield
Journal:  Microbiol Mol Biol Rev       Date:  2006-09       Impact factor: 11.056

Review 4.  The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E.

Authors:  Agamemnon J Carpousis
Journal:  Annu Rev Microbiol       Date:  2007       Impact factor: 15.500

5.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

6.  RhlB helicase rather than enolase is the beta-subunit of the Escherichia coli polynucleotide phosphorylase (PNPase)-exoribonucleolytic complex.

Authors:  Pei-Hsun Lin; Sue Lin-Chao
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-07       Impact factor: 11.205

7.  RNaseE and the other constituents of the RNA degradosome are components of the bacterial cytoskeleton.

Authors:  Aziz Taghbalout; Lawrence Rothfield
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-22       Impact factor: 11.205

8.  Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli.

Authors:  Maria C Ow; Sidney R Kushner
Journal:  Genes Dev       Date:  2002-05-01       Impact factor: 11.361

9.  Epitope tagging of chromosomal genes in Salmonella.

Authors:  S Uzzau; N Figueroa-Bossi; S Rubino; L Bossi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-11       Impact factor: 11.205

10.  RNA degradosomes exist in vivo in Escherichia coli as multicomponent complexes associated with the cytoplasmic membrane via the N-terminal region of ribonuclease E.

Authors:  G G Liou; W N Jane; S N Cohen; N S Lin; S Lin-Chao
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

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  19 in total

1.  Self-assembly of the bacterial cytoskeleton-associated RNA helicase B protein into polymeric filamentous structures.

Authors:  Aziz Taghbalout; Qingfen Yang
Journal:  J Bacteriol       Date:  2010-04-09       Impact factor: 3.490

2.  MSMEG_4626 ribonuclease from Mycobacterium smegmatis.

Authors:  Agnes Csanadi; Ildiko Faludi; Andras Miczak
Journal:  Mol Biol Rep       Date:  2009-01-20       Impact factor: 2.316

3.  Transcriptional regulation of the Escherichia coli gene rraB, encoding a protein inhibitor of RNase E.

Authors:  Li Zhou; Meng Zhao; Rachel Z Wolf; David E Graham; George Georgiou
Journal:  J Bacteriol       Date:  2009-08-28       Impact factor: 3.490

4.  Spatiotemporal patterns and transcription kinetics of induced RNA in single bacterial cells.

Authors:  Maria Valencia-Burton; Ankita Shah; Jason Sutin; Azra Borogovac; Ron M McCullough; Charles R Cantor; Amit Meller; Natalia E Broude
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-11       Impact factor: 11.205

5.  Subcellular localization of RNA degrading proteins and protein complexes in prokaryotes.

Authors:  Elena Evguenieva-Hackenberg; Verena Roppelt; Christian Lassek; Gabriele Klug
Journal:  RNA Biol       Date:  2011-01-01       Impact factor: 4.652

Review 6.  RNase E: at the interface of bacterial RNA processing and decay.

Authors:  George A Mackie
Journal:  Nat Rev Microbiol       Date:  2013-01       Impact factor: 60.633

7.  The helical MreB cytoskeleton in Escherichia coli MC1000/pLE7 is an artifact of the N-Terminal yellow fluorescent protein tag.

Authors:  Matthew T Swulius; Grant J Jensen
Journal:  J Bacteriol       Date:  2012-08-17       Impact factor: 3.490

8.  Localization of the bacterial RNA infrastructure.

Authors:  Kenneth C Keiler
Journal:  Adv Exp Med Biol       Date:  2011       Impact factor: 2.622

9.  Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus.

Authors:  Kelsi L Anderson; Paul M Dunman
Journal:  Int J Microbiol       Date:  2009-03-05

10.  Cellular electron microscopy imaging reveals the localization of the Hfq protein close to the bacterial membrane.

Authors:  Elia Diestra; Bastien Cayrol; Véronique Arluison; Cristina Risco
Journal:  PLoS One       Date:  2009-12-14       Impact factor: 3.240

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