Literature DB >> 18334420

A comparative study of biomechanical simulators in deformable registration of brain tumor images.

Evangelia I Zacharaki1, Cosmina S Hogea, George Biros, Christos Davatzikos.   

Abstract

Simulating the brain tissue deformation caused by tumor growth has been found to aid the deformable registration of brain tumor images. In this paper, we evaluate the impact that different biomechanical simulators have on the accuracy of deformable registration. We use two alternative frameworks for biomechanical simulations of mass effect in 3-D magnetic resonance (MR) brain images. The first one is based on a finite-element model of nonlinear elasticity and unstructured meshes using the commercial software package ABAQUS. The second one employs incremental linear elasticity and regular grids in a fictitious domain method. In practice, biomechanical simulations via the second approach may be at least ten times faster. Landmarks error and visual examination of the coregistered images indicate that the two alternative frameworks for biomechanical simulations lead to comparable results of deformable registration. Thus, the computationally less expensive biomechanical simulator offers a practical alternative for registration purposes.

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Year:  2008        PMID: 18334420      PMCID: PMC2645806          DOI: 10.1109/TBME.2007.905484

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  10 in total

1.  A unified statistical approach to deformation-based morphometry.

Authors:  M K Chung; K J Worsley; T Paus; C Cherif; D L Collins; J N Giedd; J L Rapoport; A C Evans
Journal:  Neuroimage       Date:  2001-09       Impact factor: 6.556

2.  HAMMER: hierarchical attribute matching mechanism for elastic registration.

Authors:  Dinggang Shen; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2002-11       Impact factor: 10.048

3.  Realistic simulation of the 3-D growth of brain tumors in MR images coupling diffusion with biomechanical deformation.

Authors:  Olivier Clatz; Maxime Sermesant; Pierre-Yves Bondiau; Hervé Delingette; Simon K Warfield; Grégoire Malandain; Nicholas Ayache
Journal:  IEEE Trans Med Imaging       Date:  2005-10       Impact factor: 10.048

4.  Deformable registration of brain tumor images via a statistical model of tumor-induced deformation.

Authors:  Ashraf Mohamed; Evangelia I Zacharaki; Dinggang Shen; Christos Davatzikos
Journal:  Med Image Anal       Date:  2006-07-24       Impact factor: 8.545

5.  A robust framework for soft tissue simulations with application to modeling brain tumor mass effect in 3D MR images.

Authors:  Cosmina Hogea; George Biros; Feby Abraham; Christos Davatzikos
Journal:  Phys Med Biol       Date:  2007-11-08       Impact factor: 3.609

6.  ORBIT: a multiresolution framework for deformable registration of brain tumor images.

Authors:  Evangelia I Zacharaki; Dinggang Shen; Seung-Koo Lee; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2008-08       Impact factor: 10.048

7.  Finite element modeling of brain tumor mass-effect from 3D medical images.

Authors:  Ashraf Mohamed; Christos Davatzikos
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

8.  Growth patterns in the developing brain detected by using continuum mechanical tensor maps.

Authors:  P M Thompson; J N Giedd; R P Woods; D MacDonald; A C Evans; A W Toga
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

9.  Atlas-based segmentation of pathological MR brain images using a model of lesion growth.

Authors:  Meritxell Bach Cuadra; Claudio Pollo; Anton Bardera; Olivier Cuisenaire; Jean-Guy Villemure; Jean-Philippe Thiran
Journal:  IEEE Trans Med Imaging       Date:  2004-10       Impact factor: 10.048

Review 10.  Computer-assisted imaging to assess brain structure in healthy and diseased brains.

Authors:  John Ashburner; John G Csernansky; Christos Davatzikos; Nick C Fox; Giovanni B Frisoni; Paul M Thompson
Journal:  Lancet Neurol       Date:  2003-02       Impact factor: 44.182

  10 in total
  12 in total

1.  Simulation of brain mass effect with an arbitrary Lagrangian and Eulerian FEM.

Authors:  Yasheng Chen; Songbai Ji; Xunlei Wu; Hongyu An; Hongtu Zhu; Dinggang Shen; Weili Lin
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

2.  PAIRWISE REGISTRATION OF IMAGES WITH MISSING CORRESPONDENCES DUE TO RESECTION.

Authors:  Nicha Chitphakdithai; James S Duncan
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2010-04-14

3.  Integrated Biophysical Modeling and Image Analysis: Application to Neuro-Oncology.

Authors:  Andreas Mang; Spyridon Bakas; Shashank Subramanian; Christos Davatzikos; George Biros
Journal:  Annu Rev Biomed Eng       Date:  2020-06-04       Impact factor: 9.590

4.  Coupling brain-tumor biophysical models and diffeomorphic image registration.

Authors:  Klaudius Scheufele; Andreas Mang; Amir Gholami; Christos Davatzikos; George Biros; Miriam Mehl
Journal:  Comput Methods Appl Mech Eng       Date:  2019-01-07       Impact factor: 6.756

5.  In-silico oncology: an approximate model of brain tumor mass effect based on directly manipulated free form deformation.

Authors:  Stefan Becker; Andreas Mang; Alina Toma; Thorsten M Buzug
Journal:  Int J Comput Assist Radiol Surg       Date:  2010-09-18       Impact factor: 2.924

6.  Biomechanical modelling of spinal tumour anisotropic growth.

Authors:  Ioanna Katsamba; Pavlos Evangelidis; Chrysovalantis Voutouri; Alkiviadis Tsamis; Vasileios Vavourakis; Triantafyllos Stylianopoulos
Journal:  Proc Math Phys Eng Sci       Date:  2020-06-03       Impact factor: 2.704

7.  Interactive modeling and evaluation of tumor growth.

Authors:  Jacob Scharcanski; Luciano Silva da Silva; David Koff; Alexander Wong
Journal:  J Digit Imaging       Date:  2009-09-19       Impact factor: 4.056

8.  Non-diffeomorphic registration of brain tumor images by simulating tissue loss and tumor growth.

Authors:  Evangelia I Zacharaki; Cosmina S Hogea; Dinggang Shen; George Biros; Christos Davatzikos
Journal:  Neuroimage       Date:  2009-07-01       Impact factor: 6.556

9.  An image-driven parameter estimation problem for a reaction-diffusion glioma growth model with mass effects.

Authors:  Cosmina Hogea; Christos Davatzikos; George Biros
Journal:  J Math Biol       Date:  2007-11-17       Impact factor: 2.259

10.  Biphasic modeling of brain tumor biomechanics and response to radiation treatment.

Authors:  Stelios Angeli; Triantafyllos Stylianopoulos
Journal:  J Biomech       Date:  2016-03-30       Impact factor: 2.712

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