Literature DB >> 18026731

An image-driven parameter estimation problem for a reaction-diffusion glioma growth model with mass effects.

Cosmina Hogea1, Christos Davatzikos, George Biros.   

Abstract

We present a framework for modeling gliomas growth and their mechanical impact on the surrounding brain tissue (the so-called, mass-effect). We employ an Eulerian continuum approach that results in a strongly coupled system of nonlinear Partial Differential Equations (PDEs): a reaction-diffusion model for the tumor growth and a piecewise linearly elastic material for the background tissue. To estimate unknown model parameters and enable patient-specific simulations we formulate and solve a PDE-constrained optimization problem. Our two main goals are the following: (1) to improve the deformable registration from images of brain tumor patients to a common stereotactic space, thereby assisting in the construction of statistical anatomical atlases; and (2) to develop predictive capabilities for glioma growth, after the model parameters are estimated for a given patient. To our knowledge, this is the first attempt in the literature to introduce an adjoint-based, PDE-constrained optimization formulation in the context of image-driven modeling spatio-temporal tumor evolution. In this paper, we present the formulation, and the solution method and we conduct 1D numerical experiments for preliminary evaluation of the overall formulation/methodology.

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Year:  2007        PMID: 18026731      PMCID: PMC2871396          DOI: 10.1007/s00285-007-0139-x

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  18 in total

1.  Fractional step methods applied to a chemotaxis model.

Authors:  R Tyson; L G Stern; R J LeVeque
Journal:  J Math Biol       Date:  2000-11       Impact factor: 2.259

2.  Simulated brain tumor growth dynamics using a three-dimensional cellular automaton.

Authors:  A R Kansal; S Torquato; I V Harsh GR; E A Chiocca; T S Deisboeck
Journal:  J Theor Biol       Date:  2000-04-21       Impact factor: 2.691

3.  Biomechanical modeling of the human head for physically based, nonrigid image registration.

Authors:  A Hagemann; K Rohr; H S Stiehl; U Spetzger; J M Gilsbach
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

4.  A robust framework for soft tissue simulations with application to modeling brain tumor mass effect in 3D MR images.

Authors:  Cosmina Hogea; George Biros; Feby Abraham; Christos Davatzikos
Journal:  Phys Med Biol       Date:  2007-11-08       Impact factor: 3.609

5.  Finite element modeling of brain tumor mass-effect from 3D medical images.

Authors:  Ashraf Mohamed; Christos Davatzikos
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

6.  Monitoring thymidine kinase and ganciclovir-induced changes in rat malignant glioma in vivo by nuclear magnetic resonance imaging.

Authors:  H Poptani; A M Puumalainen; O H Gröhn; S Loimas; R Kainulainen; S Ylä-Herttuala; R A Kauppinen
Journal:  Cancer Gene Ther       Date:  1998 Mar-Apr       Impact factor: 5.987

7.  Assessment of brain tumor cell motility in vivo and in vitro.

Authors:  M R Chicoine; D L Silbergeld
Journal:  J Neurosurg       Date:  1995-04       Impact factor: 5.115

Review 8.  Glioma invasion in the central nervous system.

Authors:  A Giese; M Westphal
Journal:  Neurosurgery       Date:  1996-08       Impact factor: 4.654

9.  Modeling glioma growth and mass effect in 3D MR images of the brain.

Authors:  Cosmina Hogea; Christos Davatzikos; George Biros
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

Review 10.  A history of the study of solid tumour growth: the contribution of mathematical modelling.

Authors:  R P Araujo; D L S McElwain
Journal:  Bull Math Biol       Date:  2004-09       Impact factor: 1.758

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  69 in total

1.  Integration of diffusion-weighted MRI data and a simple mathematical model to predict breast tumor cellularity during neoadjuvant chemotherapy.

Authors:  Nkiruka C Atuegwu; Lori R Arlinghaus; Xia Li; E Brian Welch; Bapsi A Chakravarthy; John C Gore; Thomas E Yankeelov
Journal:  Magn Reson Med       Date:  2011-09-28       Impact factor: 4.668

2.  Brain Cancer Imaging Phenomics Toolkit (brain-CaPTk): An Interactive Platform for Quantitative Analysis of Glioblastoma.

Authors:  Saima Rathore; Spyridon Bakas; Sarthak Pati; Hamed Akbari; Ratheesh Kalarot; Patmaa Sridharan; Martin Rozycki; Mark Bergman; Birkan Tunc; Ragini Verma; Michel Bilello; Christos Davatzikos
Journal:  Brainlesion       Date:  2018-02-17

3.  Deformable registration of glioma images using EM algorithm and diffusion reaction modeling.

Authors:  Ali Gooya; George Biros; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2010-09-27       Impact factor: 10.048

Review 4.  Mechanism-Based Modeling of Tumor Growth and Treatment Response Constrained by Multiparametric Imaging Data.

Authors:  David A Hormuth; Angela M Jarrett; Ernesto A B F Lima; Matthew T McKenna; David T Fuentes; Thomas E Yankeelov
Journal:  JCO Clin Cancer Inform       Date:  2019-02

5.  Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework.

Authors:  Ke Zeng; Spyridon Bakas; Aristeidis Sotiras; Hamed Akbari; Martin Rozycki; Saima Rathore; Sarthak Pati; Christos Davatzikos
Journal:  Brainlesion       Date:  2017-04-12

6.  GLISTRboost: Combining Multimodal MRI Segmentation, Registration, and Biophysical Tumor Growth Modeling with Gradient Boosting Machines for Glioma Segmentation.

Authors:  Spyridon Bakas; Ke Zeng; Aristeidis Sotiras; Saima Rathore; Hamed Akbari; Bilwaj Gaonkar; Martin Rozycki; Sarthak Pati; Christos Davatzikos
Journal:  Brainlesion       Date:  2016

7.  Biophysical Modeling of In Vivo Glioma Response After Whole-Brain Radiation Therapy in a Murine Model of Brain Cancer.

Authors:  David A Hormuth; Jared A Weis; Stephanie L Barnes; Michael I Miga; Vito Quaranta; Thomas E Yankeelov
Journal:  Int J Radiat Oncol Biol Phys       Date:  2017-12-13       Impact factor: 7.038

8.  Tumor growth prediction with hyperelastic biomechanical model, physiological data fusion, and nonlinear optimization.

Authors:  Ken C L Wong; Ronald M Summers; Electron Kebebew; Jianhua Yao
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

9.  Pancreatic Tumor Growth Prediction With Elastic-Growth Decomposition, Image-Derived Motion, and FDM-FEM Coupling.

Authors:  Ken C L Wong; Ronald M Summers; Electron Kebebew; Jianhua Yao
Journal:  IEEE Trans Med Imaging       Date:  2016-08-02       Impact factor: 10.048

10.  GLISTR: glioma image segmentation and registration.

Authors:  Ali Gooya; Kilian M Pohl; Michel Bilello; Luigi Cirillo; George Biros; Elias R Melhem; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2012-08-13       Impact factor: 10.048

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