Literature DB >> 18322066

Evaluation of the NanoChip 400 system for detection of influenza A and B, respiratory syncytial, and parainfluenza viruses.

Hiroshi Takahashi1, Sylvia A Norman, Elizabeth L Mather, Bruce K Patterson.   

Abstract

The NanoChip400 system uses multiplex PCR chemistry and electronic microarray detection of influenza A and B viruses; respiratory syncytial viruses A and B; and human parainfluenza virus types 1, 2, and 3. The results obtained with the NanoChip 400 system were compared with those obtained by direct fluorescent-antibody staining (DFA) and real-time PCR with 122 and 130 specimens, respectively. Concordance between DFA and NanoChip 400 system was obtained for 106 of 122 (86.9%) specimens. On the basis of discrepancy analysis with specimens available for confirmatory real-time PCR testing, the sensitivity and specificity of the NanoChip 400 were 98.6% and 100%, respectively. With respect to specimens previously tested by real-time PCR, the NanoChip 400 system demonstrated a sensitivity of 91.1% and a specificity of 100%. The NanoChip 400 system provides clinical laboratories with a practical, rapid, and sensitive method for the detection of common respiratory viruses.

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Year:  2008        PMID: 18322066      PMCID: PMC2395092          DOI: 10.1128/JCM.01947-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  10 in total

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Review 2.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

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Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

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Journal:  J Clin Microbiol       Date:  1997-06       Impact factor: 5.948

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Journal:  J Clin Microbiol       Date:  2000-08       Impact factor: 5.948

Review 6.  Influenza diagnosis and treatment in children: a review of studies on clinically useful tests and antiviral treatment for influenza.

Authors:  Timothy M Uyeki
Journal:  Pediatr Infect Dis J       Date:  2003-02       Impact factor: 2.129

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Journal:  J Clin Microbiol       Date:  1992-06       Impact factor: 5.948

8.  Nosocomial respiratory syncytial virus infections: the cost-effectiveness and cost-benefit of infection control.

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Journal:  Pediatrics       Date:  2000-09       Impact factor: 7.124

9.  Respiratory syncytial virus: a comparison of diagnostic modalities.

Authors:  M G Michaels; C Serdy; K Barbadora; M Green; A Apalsch; E R Wald
Journal:  Pediatr Infect Dis J       Date:  1992-08       Impact factor: 2.129

10.  Combination therapy with aerosolized ribavirin and intravenous immunoglobulin for respiratory syncytial virus disease in adult bone marrow transplant recipients.

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Journal:  Bone Marrow Transplant       Date:  1995-09       Impact factor: 5.483

  10 in total
  8 in total

Review 1.  Basic concepts of microarrays and potential applications in clinical microbiology.

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Journal:  Clin Microbiol Rev       Date:  2009-10       Impact factor: 26.132

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Authors:  Amy M Denison; Dianna M Blau; Heather A Jost; Tara Jones; Dominique Rollin; Rongbao Gao; Lindy Liu; Julu Bhatnagar; Marlene Deleon-Carnes; Wun-Ju Shieh; Christopher D Paddock; Clifton Drew; Patricia Adem; Shannon L Emery; Bo Shu; Kai-Hui Wu; Brigid Batten; Patricia W Greer; Chalanda S Smith; Jeanine Bartlett; Jeltley L Montague; Mitesh Patel; Xiyan Xu; Stephen Lindstrom; Alexander I Klimov; Sherif R Zaki
Journal:  J Mol Diagn       Date:  2011-03       Impact factor: 5.568

Review 3.  Respiratory Infections in the U.S. Military: Recent Experience and Control.

Authors:  Jose L Sanchez; Michael J Cooper; Christopher A Myers; James F Cummings; Kelly G Vest; Kevin L Russell; Joyce L Sanchez; Michelle J Hiser; Charlotte A Gaydos
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4.  Multiplexed, rapid detection of H5N1 using a PCR-free nanoparticle-based genomic microarray assay.

Authors:  Jiangqin Zhao; Shixing Tang; James Storhoff; Sudhakar Marla; Y Paul Bao; Xue Wang; Eric Y Wong; Viswanath Ragupathy; Zhiping Ye; Indira K Hewlett
Journal:  BMC Biotechnol       Date:  2010-10-13       Impact factor: 2.563

5.  Performance of the Luminex xTAG Respiratory Viral Panel Fast in a clinical laboratory setting.

Authors:  Pia Jokela; Heli Piiparinen; Laura Mannonen; Eeva Auvinen; Maija Lappalainen
Journal:  J Virol Methods       Date:  2012-03-23       Impact factor: 2.014

6.  A novel multiplex PCR-electronic microarray assay for rapid and simultaneous detection of bovine respiratory and enteric pathogens.

Authors:  Niroshan Thanthrige-Don; Oliver Lung; Tara Furukawa-Stoffer; Cody Buchanan; Tomy Joseph; Dale L Godson; John Gilleard; Trevor Alexander; Aruna Ambagala
Journal:  J Virol Methods       Date:  2018-08-10       Impact factor: 2.014

7.  A multiplex reverse transcription PCR and automated electronic microarray assay for detection and differentiation of seven viruses affecting swine.

Authors:  A Erickson; M Fisher; T Furukawa-Stoffer; A Ambagala; D Hodko; J Pasick; D P King; C Nfon; R Ortega Polo; O Lung
Journal:  Transbound Emerg Dis       Date:  2017-11-30       Impact factor: 5.005

Review 8.  Emerging molecular assays for detection and characterization of respiratory viruses.

Authors:  Wenjuan Wu; Yi-Wei Tang
Journal:  Clin Lab Med       Date:  2009-12       Impact factor: 1.935

  8 in total

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