Literature DB >> 18316406

Changes in the distributions and dynamics of polycomb repressive complexes during embryonic stem cell differentiation.

Xiaojun Ren1, Claudius Vincenz, Tom K Kerppola.   

Abstract

Polycomb group (PcG) transcription regulatory proteins maintain cell identity by sustained repression of numerous genes. The differentiation of embryonic stem (ES) cells induces a genome-wide shift in PcG target gene expression. We investigated the effects of differentiation and protein interactions on CBX family PcG protein localization and dynamics by using fluorescence imaging. In mouse ES cells, different CBX proteins exhibited distinct distributions and mobilities. Most CBX proteins were enriched in foci known as Polycomb bodies. Focus formation did not affect CBX protein mobilities, and the foci dispersed during ES cell differentiation. The mobilities of CBX proteins increased upon the induction of differentiation and decreased as differentiation progressed. The deletion of the chromobox, which mediates interactions with RING1B, prevented the immobilization of CBX proteins. In contrast, the deletion of the chromodomain, which can bind trimethylated lysine 27 of histone H3, had little effect on CBX protein dynamics. The distributions and mobilities of most CBX proteins corresponded to those of CBX-RING1B complexes detected by using bimolecular fluorescence complementation analysis. Epigenetic reprogramming during ES cell differentiation is therefore associated with global changes in the subnuclear distributions and dynamics of CBX protein complexes.

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Year:  2008        PMID: 18316406      PMCID: PMC2293085          DOI: 10.1128/MCB.00949-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  59 in total

1.  Ring1A is a transcriptional repressor that interacts with the Polycomb-M33 protein and is expressed at rhombomere boundaries in the mouse hindbrain.

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Journal:  EMBO J       Date:  1997-10-01       Impact factor: 11.598

2.  Requirement for Xist in X chromosome inactivation.

Authors:  G D Penny; G F Kay; S A Sheardown; S Rastan; N Brockdorff
Journal:  Nature       Date:  1996-01-11       Impact factor: 49.962

3.  Positional cloning of a global regulator of anterior-posterior patterning in mice.

Authors:  A Shumacher; C Faust; T Magnuson
Journal:  Nature       Date:  1996-09-19       Impact factor: 49.962

4.  Demethylation of H3K27 regulates polycomb recruitment and H2A ubiquitination.

Authors:  Min Gyu Lee; Raffaella Villa; Patrick Trojer; Jessica Norman; Kai-Ping Yan; Danny Reinberg; Luciano Di Croce; Ramin Shiekhattar
Journal:  Science       Date:  2007-08-30       Impact factor: 47.728

5.  MPc2, a new murine homolog of the Drosophila polycomb protein is a member of the mouse polycomb transcriptional repressor complex.

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Journal:  J Mol Biol       Date:  1997-11-14       Impact factor: 5.469

6.  Altered cellular proliferation and mesoderm patterning in Polycomb-M33-deficient mice.

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Journal:  Development       Date:  1997-02       Impact factor: 6.868

7.  Differentiation of embryonic stem cells into adipocytes in vitro.

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Journal:  J Cell Sci       Date:  1997-06       Impact factor: 5.285

8.  The distribution of polycomb-group proteins during cell division and development in Drosophila embryos: impact on models for silencing.

Authors:  P Buchenau; J Hodgson; H Strutt; D J Arndt-Jovin
Journal:  J Cell Biol       Date:  1998-04-20       Impact factor: 10.539

9.  Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.

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Journal:  Development       Date:  1997-10       Impact factor: 6.868

10.  The human polycomb group complex associates with pericentromeric heterochromatin to form a novel nuclear domain.

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Journal:  J Cell Biol       Date:  1998-08-24       Impact factor: 10.539

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  47 in total

1.  Nuclear condensates of the Polycomb protein chromobox 2 (CBX2) assemble through phase separation.

Authors:  Roubina Tatavosian; Samantha Kent; Kyle Brown; Tingting Yao; Huy Nguyen Duc; Thao Ngoc Huynh; Chao Yu Zhen; Brian Ma; Haobin Wang; Xiaojun Ren
Journal:  J Biol Chem       Date:  2018-12-04       Impact factor: 5.157

2.  Interaction proteomics analysis of polycomb proteins defines distinct PRC1 complexes in mammalian cells.

Authors:  Julien Vandamme; Pamela Völkel; Claire Rosnoblet; Perrine Le Faou; Pierre-Olivier Angrand
Journal:  Mol Cell Proteomics       Date:  2011-01-31       Impact factor: 5.911

Review 3.  Structure and mechanisms of lysine methylation recognition by the chromodomain in gene transcription.

Authors:  Kyoko L Yap; Ming-Ming Zhou
Journal:  Biochemistry       Date:  2011-02-23       Impact factor: 3.162

Review 4.  A new world of Polycombs: unexpected partnerships and emerging functions.

Authors:  Yuri B Schwartz; Vincenzo Pirrotta
Journal:  Nat Rev Genet       Date:  2013-11-12       Impact factor: 53.242

5.  Compaction of chromatin by diverse Polycomb group proteins requires localized regions of high charge.

Authors:  Daniel J Grau; Brad A Chapman; Joe D Garlick; Mark Borowsky; Nicole J Francis; Robert E Kingston
Journal:  Genes Dev       Date:  2011-10-15       Impact factor: 11.361

6.  REST interacts with Cbx proteins and regulates polycomb repressive complex 1 occupancy at RE1 elements.

Authors:  Xiaojun Ren; Tom K Kerppola
Journal:  Mol Cell Biol       Date:  2011-03-14       Impact factor: 4.272

7.  Structure-Activity Relationships and Kinetic Studies of Peptidic Antagonists of CBX Chromodomains.

Authors:  Jacob I Stuckey; Catherine Simpson; Jacqueline L Norris-Drouin; Stephanie H Cholensky; Junghyun Lee; Ryan Pasca; Nancy Cheng; Bradley M Dickson; Kenneth H Pearce; Stephen V Frye; Lindsey I James
Journal:  J Med Chem       Date:  2016-09-19       Impact factor: 7.446

8.  Epigenetic signatures associated with different levels of differentiation potential in human stem cells.

Authors:  Pablo Aranda; Xabier Agirre; Esteban Ballestar; Enrique J Andreu; José Román-Gómez; Inés Prieto; José Ignacio Martín-Subero; Juan Cruz Cigudosa; Reiner Siebert; Manel Esteller; Felipe Prosper
Journal:  PLoS One       Date:  2009-11-13       Impact factor: 3.240

9.  Hsp90 affecting chromatin remodeling might explain transgenerational epigenetic inheritance in Drosophila.

Authors:  Douglas M Ruden; Xiangyi Lu
Journal:  Curr Genomics       Date:  2008-11       Impact factor: 2.236

10.  Novel motifs distinguish multiple homologues of Polycomb in vertebrates: expansion and diversification of the epigenetic toolkit.

Authors:  Ramamoorthy Senthilkumar; Rakesh K Mishra
Journal:  BMC Genomics       Date:  2009-11-20       Impact factor: 3.969

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