Literature DB >> 18312263

The CBS subdomain of inosine 5'-monophosphate dehydrogenase regulates purine nucleotide turnover.

Maxim Pimkin1, George D Markham.   

Abstract

Inosine 5'-monophosphate dehydrogenase (IMPDH) catalyses the rate-limiting step in guanine nucleotide biosynthesis. IMPDH has an evolutionary conserved CBS subdomain of unknown function. The subdomain can be deleted without impairing the in vitro IMPDH catalytic activity and is the site for mutations associated with human retinitis pigmentosa. A guanine-prototrophic Escherichia coli strain, MP101, was constructed with the subdomain sequence deleted from the chromosomal gene for IMPDH. The ATP content was substantially elevated in MP101 whereas the GTP content was slighty reduced. The activities of IMPDH, adenylosuccinate synthetase and GMP reductase were two to threefold lower in MP101 crude extracts compared with the BW25113 wild-type strain. Guanine induced a threefold reduction in the MP101 ATP pool and a fourfold increase in the GTP pool within 10 min of addition to growing cells; this response does not result from the reduced IMPDH activity or starvation for guanylates. In vivo kinetic analysis using 14-C tracers and 33-P pulse-chasing revealed mutation-associated changes in purine nucleotide fluxes and turnover rates. We conclude that the CBS subdomain of IMPDH may coordinate the activities of the enzymes of purine nucleotide metabolism and is essential for maintaining the normal ATP and GTP pool sizes in E. coli.

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Year:  2008        PMID: 18312263      PMCID: PMC2279236          DOI: 10.1111/j.1365-2958.2008.06153.x

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  52 in total

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Journal:  J Biol Chem       Date:  1999-02-26       Impact factor: 5.157

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Authors:  A Bateman
Journal:  Trends Biochem Sci       Date:  1997-01       Impact factor: 13.807

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Authors:  R Zhang; G Evans; F J Rotella; E M Westbrook; D Beno; E Huberman; A Joachimiak; F R Collart
Journal:  Biochemistry       Date:  1999-04-13       Impact factor: 3.162

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Journal:  J Bacteriol       Date:  1980-12       Impact factor: 3.490

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Authors:  H Nakamura; Y Natsumeda; M Nagai; T Shiotani; G Weber
Journal:  Anal Biochem       Date:  1992-10       Impact factor: 3.365

8.  Two purine biosynthetic enzymes that are required for cadmium tolerance in Schizosaccharomyces pombe utilize cysteine sulfinate in vitro.

Authors:  R H Juang; K F McCue; D W Ow
Journal:  Arch Biochem Biophys       Date:  1993-08-01       Impact factor: 4.013

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Journal:  J Biol Chem       Date:  1980-11-25       Impact factor: 5.157

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Authors:  K F Jensen
Journal:  J Gen Microbiol       Date:  1989-04
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  28 in total

Review 1.  The antibiotic potential of prokaryotic IMP dehydrogenase inhibitors.

Authors:  L Hedstrom; G Liechti; J B Goldberg; D R Gollapalli
Journal:  Curr Med Chem       Date:  2011       Impact factor: 4.530

2.  The Bare Essentials of Antibiotic Target Validation.

Authors:  Lizbeth Hedstrom
Journal:  ACS Infect Dis       Date:  2016-11-09       Impact factor: 5.084

Review 3.  IMP dehydrogenase: structure, mechanism, and inhibition.

Authors:  Lizbeth Hedstrom
Journal:  Chem Rev       Date:  2009-07       Impact factor: 60.622

4.  Purification, crystallization and preliminary X-ray diffraction analysis of the CBS-domain pair from the Methanococcus jannaschii protein MJ0100.

Authors:  María Lucas; Danel Kortazar; Egoitz Astigarraga; José A Fernández; Jose M Mato; María Luz Martínez-Chantar; Luis Alfonso Martínez-Cruz
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-09-30

5.  Chromophorylation of cyanobacteriochrome Slr1393 from Synechocystis sp. PCC 6803 is regulated by protein Slr2111 through allosteric interaction.

Authors:  Qi He; Qi-Ying Tang; Ya-Fang Sun; Ming Zhou; Wolfgang Gärtner; Kai-Hong Zhao
Journal:  J Biol Chem       Date:  2018-09-21       Impact factor: 5.157

6.  The cystathionine-β-synthase domains on the guanosine 5''-monophosphate reductase and inosine 5'-monophosphate dehydrogenase enzymes from Leishmania regulate enzymatic activity in response to guanylate and adenylate nucleotide levels.

Authors:  Sabrina Smith; Jan Boitz; Ehzilan Subramanian Chidambaram; Abhishek Chatterjee; Maria Ait-Tihyaty; Buddy Ullman; Armando Jardim
Journal:  Mol Microbiol       Date:  2016-03-10       Impact factor: 3.501

Review 7.  The dynamic determinants of reaction specificity in the IMPDH/GMPR family of (β/α)(8) barrel enzymes.

Authors:  Lizbeth Hedstrom
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-02-15       Impact factor: 8.250

8.  IMP dehydrogenase type 1 associates with polyribosomes translating rhodopsin mRNA.

Authors:  Sarah E Mortimer; Dong Xu; Dharia McGrew; Nobuko Hamaguchi; Hoong Chuin Lim; Sara J Bowne; Stephen P Daiger; Lizbeth Hedstrom
Journal:  J Biol Chem       Date:  2008-10-30       Impact factor: 5.157

9.  A regulatory role of the Bateman domain of IMP dehydrogenase in adenylate nucleotide biosynthesis.

Authors:  Maxim Pimkin; Julia Pimkina; George D Markham
Journal:  J Biol Chem       Date:  2009-01-18       Impact factor: 5.157

10.  Expanding Benzoxazole-Based Inosine 5'-Monophosphate Dehydrogenase (IMPDH) Inhibitor Structure-Activity As Potential Antituberculosis Agents.

Authors:  Shibin Chacko; Helena I M Boshoff; Vinayak Singh; Davide M Ferraris; Deviprasad R Gollapalli; Minjia Zhang; Ann P Lawson; Michael J Pepi; Andrzej Joachimiak; Menico Rizzi; Valerie Mizrahi; Gregory D Cuny; Lizbeth Hedstrom
Journal:  J Med Chem       Date:  2018-05-30       Impact factor: 7.446

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