Literature DB >> 29746130

Expanding Benzoxazole-Based Inosine 5'-Monophosphate Dehydrogenase (IMPDH) Inhibitor Structure-Activity As Potential Antituberculosis Agents.

Shibin Chacko, Helena I M Boshoff1, Vinayak Singh2, Davide M Ferraris3, Deviprasad R Gollapalli, Minjia Zhang, Ann P Lawson, Michael J Pepi, Andrzej Joachimiak4,5, Menico Rizzi3, Valerie Mizrahi6, Gregory D Cuny7, Lizbeth Hedstrom.   

Abstract

New drugs and molecular targets are urgently needed to address the emergence and spread of drug-resistant tuberculosis. Mycobacterium tuberculosis ( Mtb) inosine 5'-monophosphate dehydrogenase 2 ( MtbIMPDH2) is a promising yet controversial potential target. The inhibition of MtbIMPDH2 blocks the biosynthesis of guanine nucleotides, but high concentrations of guanine can potentially rescue the bacteria. Herein we describe an expansion of the structure-activity relationship (SAR) for the benzoxazole series of MtbIMPDH2 inhibitors and demonstrate that minimum inhibitory concentrations (MIC) of ≤1 μM can be achieved. The antibacterial activity of the most promising compound, 17b (Q151), is derived from the inhibition of MtbIMPDH2 as demonstrated by conditional knockdown and resistant strains. Importantly, guanine does not change the MIC of 17b, alleviating the concern that guanine salvage can protect Mtb in vivo. These findings suggest that MtbIMPDH2 is a vulnerable target for tuberculosis.

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Year:  2018        PMID: 29746130      PMCID: PMC6166404          DOI: 10.1021/acs.jmedchem.7b01839

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  51 in total

1.  Structure-activity relationship study of selective benzimidazole-based inhibitors of Cryptosporidium parvum IMPDH.

Authors:  Sivapriya Kirubakaran; Suresh Kumar Gorla; Lisa Sharling; Minjia Zhang; Xiaoping Liu; Soumya S Ray; Iain S Macpherson; Boris Striepen; Lizbeth Hedstrom; Gregory D Cuny
Journal:  Bioorg Med Chem Lett       Date:  2012-01-24       Impact factor: 2.823

2.  Benzoxazoles, Phthalazinones, and Arylurea-Based Compounds with IMP Dehydrogenase-Independent Antibacterial Activity against Francisella tularensis.

Authors:  Suresh Kumar Gorla; Yan Zhang; Meaghan M Rabideau; Aiping Qin; Shibin Chacko; Amanda L House; Corey R Johnson; Kavitha Mandapati; Hannah M Bernstein; Elizabeth S McKenney; Helena Boshoff; Minjia Zhang; Ian J Glomski; Joanna B Goldberg; Gregory D Cuny; Barbara J Mann; Lizbeth Hedstrom
Journal:  Antimicrob Agents Chemother       Date:  2017-09-22       Impact factor: 5.191

3.  Crystal structure of a ternary complex of Tritrichomonas foetus inosine 5'-monophosphate dehydrogenase: NAD+ orients the active site loop for catalysis.

Authors:  Lu Gan; Gregory A Petsko; Lizbeth Hedstrom
Journal:  Biochemistry       Date:  2002-11-05       Impact factor: 3.162

4.  IMP dehydrogenase type 1 associates with polyribosomes translating rhodopsin mRNA.

Authors:  Sarah E Mortimer; Dong Xu; Dharia McGrew; Nobuko Hamaguchi; Hoong Chuin Lim; Sara J Bowne; Stephen P Daiger; Lizbeth Hedstrom
Journal:  J Biol Chem       Date:  2008-10-30       Impact factor: 5.157

5.  Optimization of benzoxazole-based inhibitors of Cryptosporidium parvum inosine 5'-monophosphate dehydrogenase.

Authors:  Suresh Kumar Gorla; Mandapati Kavitha; Minjia Zhang; James En Wai Chin; Xiaoping Liu; Boris Striepen; Magdalena Makowska-Grzyska; Youngchang Kim; Andrzej Joachimiak; Lizbeth Hedstrom; Gregory D Cuny
Journal:  J Med Chem       Date:  2013-05-13       Impact factor: 7.446

Review 6.  Comprehensive analysis of methods used for the evaluation of compounds against Mycobacterium tuberculosis.

Authors:  Scott G Franzblau; Mary Ann DeGroote; Sang Hyun Cho; Koen Andries; Eric Nuermberger; Ian M Orme; Khisimuzi Mdluli; Iñigo Angulo-Barturen; Thomas Dick; Veronique Dartois; Anne J Lenaerts
Journal:  Tuberculosis (Edinb)       Date:  2012-08-30       Impact factor: 3.131

Review 7.  Loss-of-function genetic tools for animal models: cross-species and cross-platform differences.

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Journal:  Nat Rev Genet       Date:  2016-10-31       Impact factor: 53.242

8.  Essential but Not Vulnerable: Indazole Sulfonamides Targeting Inosine Monophosphate Dehydrogenase as Potential Leads against Mycobacterium tuberculosis.

Authors:  Yumi Park; Angela Pacitto; Tracy Bayliss; Laura A T Cleghorn; Zhe Wang; Travis Hartman; Kriti Arora; Thomas R Ioerger; Jim Sacchettini; Menico Rizzi; Stefano Donini; Tom L Blundell; David B Ascher; Kyu Rhee; Ardala Breda; Nian Zhou; Veronique Dartois; Surendranadha Reddy Jonnala; Laura E Via; Valerie Mizrahi; Ola Epemolu; Laste Stojanovski; Fred Simeons; Maria Osuna-Cabello; Lucy Ellis; Claire J MacKenzie; Alasdair R C Smith; Susan H Davis; Dinakaran Murugesan; Kirsteen I Buchanan; Penelope A Turner; Margaret Huggett; Fabio Zuccotto; Maria Jose Rebollo-Lopez; Maria Jose Lafuente-Monasterio; Olalla Sanz; Gracia Santos Diaz; Joël Lelièvre; Lluis Ballell; Carolyn Selenski; Matthew Axtman; Sonja Ghidelli-Disse; Hannah Pflaumer; Markus Bösche; Gerard Drewes; Gail M Freiberg; Matthew D Kurnick; Myron Srikumaran; Dale J Kempf; Simon R Green; Peter C Ray; Kevin Read; Paul Wyatt; Clifton E Barry; Helena I Boshoff
Journal:  ACS Infect Dis       Date:  2016-10-17       Impact factor: 5.084

9.  Identification of novel Mt-Guab2 inhibitor series active against M. tuberculosis.

Authors:  Veeraraghavan Usha; Judith V Hobrath; Sudagar S Gurcha; Robert C Reynolds; Gurdyal S Besra
Journal:  PLoS One       Date:  2012-03-29       Impact factor: 3.240

10.  Synthesis, in vitro evaluation and cocrystal structure of 4-oxo-[1]benzopyrano[4,3-c]pyrazole Cryptosporidium parvum inosine 5'-monophosphate dehydrogenase (CpIMPDH) inhibitors.

Authors:  Zhuming Sun; Jihan Khan; Magdalena Makowska-Grzyska; Minjia Zhang; Joon Hyung Cho; Chalada Suebsuwong; Pascal Vo; Deviprasad R Gollapalli; Youngchang Kim; Andrzej Joachimiak; Lizbeth Hedstrom; Gregory D Cuny
Journal:  J Med Chem       Date:  2014-12-04       Impact factor: 7.446

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  11 in total

Review 1.  Inhibitors of inosine 5'-monophosphate dehydrogenase as emerging new generation antimicrobial agents.

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Review 3.  Molecule Property Analyses of Active Compounds for Mycobacterium tuberculosis.

Authors:  Vadim Makarov; Elena Salina; Robert C Reynolds; Phyo Phyo Kyaw Zin; Sean Ekins
Journal:  J Med Chem       Date:  2020-04-20       Impact factor: 7.446

4.  A d-Phenylalanine-Benzoxazole Derivative Reveals the Role of the Essential Enzyme Rv3603c in the Pantothenate Biosynthetic Pathway of Mycobacterium tuberculosis.

Authors:  Michael J Pepi; Shibin Chacko; Gary M Marqus; Vinayak Singh; Zhe Wang; Kyle Planck; Ryan T Cullinane; Penchala N Meka; Deviprasad R Gollapalli; Thomas R Ioerger; Kyu Y Rhee; Gregory D Cuny; Helena I M Boshoff; Lizbeth Hedstrom
Journal:  ACS Infect Dis       Date:  2022-01-11       Impact factor: 5.578

5.  The Enzymatic Activity of Inosine 5'-Monophosphate Dehydrogenase May Not Be a Vulnerable Target for Staphylococcus aureus Infections.

Authors:  Gyan Modi; Gary M Marqus; Mohana Rao Vippila; Deviprasad R Gollapalli; Youngchang Kim; Adhar C Manna; Shibin Chacko; Natalia Maltseva; Xingyou Wang; Ryan T Cullinane; Yubo Zhang; Judy L M Kotler; Petr Kuzmic; Minjia Zhang; Ann P Lawson; Andrzej Joachimiak; Ambrose Cheung; Barry B Snider; David M Rothstein; Gregory D Cuny; Lizbeth Hedstrom
Journal:  ACS Infect Dis       Date:  2021-09-30       Impact factor: 5.578

6.  Evaluation of Bronopol and Disulfiram as Potential Candidatus Liberibacter asiaticus Inosine 5'-Monophosphate Dehydrogenase Inhibitors by Using Molecular Docking and Enzyme Kinetic.

Authors:  Jing Nan; Shaoran Zhang; Ping Zhan; Ling Jiang
Journal:  Molecules       Date:  2020-05-14       Impact factor: 4.411

7.  Discovery of 2-phenoxyacetamides as inhibitors of the Wnt-depalmitoleating enzyme NOTUM from an X-ray fragment screen.

Authors:  Benjamin N Atkinson; David Steadman; Yuguang Zhao; James Sipthorp; Luca Vecchia; Reinis R Ruza; Fiona Jeganathan; Georgie Lines; Sarah Frew; Amy Monaghan; Svend Kjær; Magda Bictash; E Yvonne Jones; Paul V Fish
Journal:  Medchemcomm       Date:  2019-04-29       Impact factor: 3.597

Review 8.  Targeting Genome Integrity in Mycobacterium Tuberculosis: From Nucleotide Synthesis to DNA Replication and Repair.

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9.  Structural characterization of glycinamide-RNase-transformylase T from Mycobacterium tuberculosis.

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Journal:  Emerg Microbes Infect       Date:  2020-01-02       Impact factor: 7.163

10.  Synthesis and Structure-Activity relationship of 1-(5-isoquinolinesulfonyl)piperazine analogues as inhibitors of Mycobacterium tuberculosis IMPDH.

Authors:  Vinayak Singh; Angela Pacitto; Stefano Donini; Davide M Ferraris; Sándor Boros; Eszter Illyés; Bálint Szokol; Menico Rizzi; Tom L Blundell; David B Ascher; Janos Pato; Valerie Mizrahi
Journal:  Eur J Med Chem       Date:  2019-04-15       Impact factor: 6.514

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