Literature DB >> 18311926

Resonance Raman studies of cytochrome P450 2B4 in its interactions with substrates and redox partners.

Piotr J Mak1, Sang-Choul Im, Haoming Zhang, Lucy A Waskell, James R Kincaid.   

Abstract

Resonance Raman studies of P450 2B4 are reported for the substrate-free form and when bound to the substrates, benzphetamine (BZ) or butylated hydroxytoluene (BHT), the latter representing a substrate capable of inducing an especially effective conversion to the high-spin state. In addition to studies of the ferric resting state, spectra are acquired for the ferrous CO ligated form. Importantly, for the first time, the RR technique is effectively applied to interrogate the changes in active site structure induced by binding of cytochrome P450 reductase (CPR) and Mn(III) cytochrome b 5 (Mn cyt b 5); the manganese derivative of cyt b 5 was employed to avoid spectroscopic interferences. The results, consistent with early work on mammalian P450s, demonstrate that substrate structure has minimal effects on heme structure or the FeCO fragment of the ferrous CO derivatives. Similarly, the data indicate that the protein is flexible and that substrate binding does not exert significant strain on the heme peripheral groups, in contrast to P450 cam, where substantial effects on heme peripheral groups are seen. However, significant differences are observed in the RR spectra of P450 2B4 when bound with the different redox partners, indicating that the heme structure is clearly sensitive to perturbations near the proximal heme binding site. The most substantial changes are displacements of the peripheral vinyl groups toward planarity with the heme macrocycle by cyt b 5 but away from planarity by CPR. These changes can have an impact on heme reduction potential. Most interestingly, these RR results support an earlier observation that the combination of benzphetamine and cyt b 5 binding produce a synergy leading to unique active site structural changes when both are bound.

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Year:  2008        PMID: 18311926     DOI: 10.1021/bi800034b

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

Review 1.  Substrate binding to cytochromes P450.

Authors:  Emre M Isin; F Peter Guengerich
Journal:  Anal Bioanal Chem       Date:  2008-07-13       Impact factor: 4.142

Review 2.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

3.  Spin equilibrium and O₂-binding kinetics of Mycobacterium tuberculosis CYP51 with mutations in the histidine-threonine dyad.

Authors:  Gareth K Jennings; Anuja Modi; Justin E Elenewski; Caroline M Ritchie; Thuy Nguyen; Keith C Ellis; John C Hackett
Journal:  J Inorg Biochem       Date:  2014-04-12       Impact factor: 4.155

Review 4.  The interaction of microsomal cytochrome P450 2B4 with its redox partners, cytochrome P450 reductase and cytochrome b(5).

Authors:  Sang-Choul Im; Lucy Waskell
Journal:  Arch Biochem Biophys       Date:  2010-11-03       Impact factor: 4.013

5.  Defining CYP3A4 structural responses to substrate binding. Raman spectroscopic studies of a nanodisc-incorporated mammalian cytochrome P450.

Authors:  Piotr J Mak; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar; James R Kincaid
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

6.  Active Site Structures of CYP11A1 in the Presence of Its Physiological Substrates and Alterations upon Binding of Adrenodoxin.

Authors:  Qianhong Zhu; Piotr J Mak; Robert C Tuckey; James R Kincaid
Journal:  Biochemistry       Date:  2017-10-20       Impact factor: 3.162

7.  Resonance Raman spectroscopy reveals that substrate structure selectively impacts the heme-bound diatomic ligands of CYP17.

Authors:  Piotr J Mak; Michael C Gregory; Stephen G Sligar; James R Kincaid
Journal:  Biochemistry       Date:  2013-12-20       Impact factor: 3.162

8.  Spectral Characterization of a Novel NO Sensing Protein in Bacteria: NosP.

Authors:  Bezalel A Bacon; Yilin Liu; James R Kincaid; Elizabeth M Boon
Journal:  Biochemistry       Date:  2018-10-16       Impact factor: 3.162

9.  Experimental documentation of the structural consequences of hydrogen-bonding interactions to the proximal cysteine of a cytochrome P450.

Authors:  Piotr J Mak; Yuting Yang; Sangchoul Im; Lucy A Waskell; James R Kincaid
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-11       Impact factor: 15.336

10.  The use of isomeric testosterone dimers to explore allosteric effects in substrate binding to cytochrome P450 CYP3A4.

Authors:  Ilia G Denisov; Piotr J Mak; Yelena V Grinkova; Dominic Bastien; Gervais Bérubé; Stephen G Sligar; James R Kincaid
Journal:  J Inorg Biochem       Date:  2015-12-31       Impact factor: 4.155

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