Literature DB >> 24328388

Resonance Raman spectroscopy reveals that substrate structure selectively impacts the heme-bound diatomic ligands of CYP17.

Piotr J Mak1, Michael C Gregory, Stephen G Sligar, James R Kincaid.   

Abstract

An important function of steroidogenic cytochromes P450 is the transformation of cholesterol to produce androgens, estrogens, and the corticosteroids. The activities of cytochrome P450c17 (CYP17) are essential in sex hormone biosynthesis, with severe developmental defects being a consequence of deficiency or mutations. The first reaction catalyzed by this multifunctional P450 is the 17α-hydroxylation of pregnenolone (PREG) to 17α-hydroxypregnenolone (17-OH PREG) and progesterone (PROG) to 17α-hydroxyprogesterone (17-OH PROG). The hydroxylated products then either are used for production of corticoids or undergo a second CYP17 catalyzed transformation, representing the first committed step of androgen formation. While the hydroxylation reactions are catalyzed by the well-known Compound I intermediate, the lyase reaction is believed to involve nucleophilic attack of the earlier peroxo- intermediate on the C20-carbonyl. Herein, resonance Raman (rR) spectroscopy reveals that substrate structure does not impact heme structure for this set of physiologically important substrates. On the other hand, rR spectra obtained here for the ferrous CO adducts with these four substrates show that substrates do interact differently with the Fe-C-O fragment, with large differences between the spectra obtained for the samples containing 17-OH PROG and 17-OH PREG, the latter providing evidence for the presence of two Fe-C-O conformers. Collectively, these results demonstrate that individual substrates can differentially impact the disposition of a heme-bound ligand, including dioxygen, altering the reactivity patterns in such a way as to promote preferred chemical conversions, thereby avoiding the profound functional consequences of unwanted side reactions.

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Year:  2013        PMID: 24328388      PMCID: PMC3922198          DOI: 10.1021/bi4014424

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  38 in total

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2.  A thermodynamic model of regulation: modulation of redox equilibria in camphor monoxygenase.

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Journal:  Proc Natl Acad Sci U S A       Date:  1976-04       Impact factor: 11.205

Review 3.  The molecular biology, biochemistry, and physiology of human steroidogenesis and its disorders.

Authors:  Walter L Miller; Richard J Auchus
Journal:  Endocr Rev       Date:  2010-11-04       Impact factor: 19.871

4.  Defining CYP3A4 structural responses to substrate binding. Raman spectroscopic studies of a nanodisc-incorporated mammalian cytochrome P450.

Authors:  Piotr J Mak; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar; James R Kincaid
Journal:  J Am Chem Soc       Date:  2011-01-05       Impact factor: 15.419

5.  The resonance Raman frequencies of the Fe-CO stretching and bending modes in the CO complex of cytochrome P-450cam.

Authors:  T Uno; Y Nishimura; R Makino; T Iizuka; Y Ishimura; M Tsuboi
Journal:  J Biol Chem       Date:  1985-02-25       Impact factor: 5.157

Review 6.  Membrane protein assembly into Nanodiscs.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

7.  Effects of systematic peripheral group deuteration on the low-frequency resonance Raman spectra of myoglobin derivatives.

Authors:  Piotr J Mak; Edyta Podstawka; James R Kincaid; Leonard M Proniewicz
Journal:  Biopolymers       Date:  2004-10-15       Impact factor: 2.505

8.  Phe393 mutants of cytochrome P450 BM3 with modified heme redox potentials have altered heme vinyl and propionate conformations.

Authors:  Zhucheng Chen; Tobias W B Ost; Johannes P M Schelvis
Journal:  Biochemistry       Date:  2004-02-24       Impact factor: 3.162

9.  Defining the structural consequences of mechanism-based inactivation of mammalian cytochrome P450 2B4 using resonance Raman spectroscopy.

Authors:  Piotr J Mak; Haoming Zhang; Paul F Hollenberg; James R Kincaid
Journal:  J Am Chem Soc       Date:  2010-02-10       Impact factor: 15.419

10.  Differential hydrogen bonding in human CYP17 dictates hydroxylation versus lyase chemistry.

Authors:  Michael Gregory; Piotr J Mak; Stephen G Sligar; James R Kincaid
Journal:  Angew Chem Int Ed Engl       Date:  2013-04-10       Impact factor: 15.336

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  10 in total

Review 1.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

Review 2.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

Review 3.  Rapid kinetic methods to dissect steroidogenic cytochrome P450 reaction mechanisms.

Authors:  Francis K Yoshimoto; Richard J Auchus
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4.  Active Site Structures of CYP11A1 in the Presence of Its Physiological Substrates and Alterations upon Binding of Adrenodoxin.

Authors:  Qianhong Zhu; Piotr J Mak; Robert C Tuckey; James R Kincaid
Journal:  Biochemistry       Date:  2017-10-20       Impact factor: 3.162

5.  Human P450 CYP17A1: Control of Substrate Preference by Asparagine 202.

Authors:  Michael C Gregory; Piotr J Mak; Yogan Khatri; James R Kincaid; Stephen G Sligar
Journal:  Biochemistry       Date:  2018-01-24       Impact factor: 3.162

6.  Spectral Characterization of a Novel NO Sensing Protein in Bacteria: NosP.

Authors:  Bezalel A Bacon; Yilin Liu; James R Kincaid; Elizabeth M Boon
Journal:  Biochemistry       Date:  2018-10-16       Impact factor: 3.162

7.  The use of isomeric testosterone dimers to explore allosteric effects in substrate binding to cytochrome P450 CYP3A4.

Authors:  Ilia G Denisov; Piotr J Mak; Yelena V Grinkova; Dominic Bastien; Gervais Bérubé; Stephen G Sligar; James R Kincaid
Journal:  J Inorg Biochem       Date:  2015-12-31       Impact factor: 4.155

8.  Evidence that cytochrome b5 acts as a redox donor in CYP17A1 mediated androgen synthesis.

Authors:  Ruchia Duggal; Yilin Liu; Michael C Gregory; Ilia G Denisov; James R Kincaid; Stephen G Sligar
Journal:  Biochem Biophys Res Commun       Date:  2016-06-10       Impact factor: 3.575

9.  Structures of human steroidogenic cytochrome P450 17A1 with substrates.

Authors:  Elyse M Petrunak; Natasha M DeVore; Patrick R Porubsky; Emily E Scott
Journal:  J Biol Chem       Date:  2014-10-09       Impact factor: 5.157

10.  Resonance Raman spectroscopy of the oxygenated intermediates of human CYP19A1 implicates a compound i intermediate in the final lyase step.

Authors:  Piotr J Mak; Abhinav Luthra; Stephen G Sligar; James R Kincaid
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  10 in total

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