Literature DB >> 18622598

Substrate binding to cytochromes P450.

Emre M Isin1, F Peter Guengerich.   

Abstract

P450s have attracted tremendous attention owing to not only their involvement in the metabolism of drug molecules and endogenous substrates but also the unusual nature of the reaction they catalyze, namely, the oxidation of unactivated C-H bonds. The binding of substrates to P450s, which is usually viewed as the first step in the catalytic cycle, has been studied extensively via a variety of biochemical and biophysical approaches. These studies were directed towards answering different questions related to P450s, including mechanism of oxidation, substrate properties, unusual substrate oxidation kinetics, function, and active-site features. Some of the substrate binding studies extending over a period of more than 40 years of dedicated work have been summarized in this review and categorized by the techniques employed in the binding studies.

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Year:  2008        PMID: 18622598      PMCID: PMC4756639          DOI: 10.1007/s00216-008-2244-0

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  175 in total

1.  Role of protein and substrate dynamics in catalysis by Pseudomonas putida cytochrome P450cam.

Authors:  Swati Prasad; Samaresh Mitra
Journal:  Biochemistry       Date:  2002-12-10       Impact factor: 3.162

2.  A thermodynamic model of regulation: modulation of redox equilibria in camphor monoxygenase.

Authors:  S G Sligar; I C Gunsalus
Journal:  Proc Natl Acad Sci U S A       Date:  1976-04       Impact factor: 11.205

3.  Conformational transitions and redox potential shifts of cytochrome P450 induced by immobilization.

Authors:  Smilja Todorovic; Christiane Jung; Peter Hildebrandt; Daniel H Murgida
Journal:  J Biol Inorg Chem       Date:  2005-12-03       Impact factor: 3.358

Review 4.  Predicting the oxidative metabolism of statins: an application of the MetaSite algorithm.

Authors:  Giulia Caron; Giuseppe Ermondi; Bernard Testa
Journal:  Pharm Res       Date:  2007-03       Impact factor: 4.200

5.  Measurement of substrate and inhibitor binding to microsomal cytochrome P-450 by optical-difference spectroscopy.

Authors:  C R Jefcoate
Journal:  Methods Enzymol       Date:  1978       Impact factor: 1.600

6.  Time-resolved fluorescence studies of heterotropic ligand binding to cytochrome P450 3A4.

Authors:  Jed N Lampe; William M Atkins
Journal:  Biochemistry       Date:  2006-10-10       Impact factor: 3.162

7.  High-resolution crystal structure of cytochrome P450cam.

Authors:  T L Poulos; B C Finzel; A J Howard
Journal:  J Mol Biol       Date:  1987-06-05       Impact factor: 5.469

8.  Resonance surface plasmon spectroscopy: low molecular weight substrate binding to cytochrome p450.

Authors:  Jing Zhao; Aditi Das; Xiaoyu Zhang; George C Schatz; Stephen G Sligar; Richard P Van Duyne
Journal:  J Am Chem Soc       Date:  2006-08-30       Impact factor: 15.419

9.  Preferred orientations in the binding of 4'-hydroxyacetanilide (acetaminophen) to cytochrome P450 1A1 and 2B1 isoforms as determined by 13C- and 15N-NMR relaxation studies.

Authors:  T G Myers; K E Thummel; T F Kalhorn; S D Nelson
Journal:  J Med Chem       Date:  1994-03-18       Impact factor: 7.446

Review 10.  Cytochrome p450 and chemical toxicology.

Authors:  F Peter Guengerich
Journal:  Chem Res Toxicol       Date:  2007-12-06       Impact factor: 3.739

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  46 in total

1.  Coenzyme A-dependent aerobic metabolism of benzoate via epoxide formation.

Authors:  Liv J Rather; Bettina Knapp; Wolfgang Haehnel; Georg Fuchs
Journal:  J Biol Chem       Date:  2010-05-07       Impact factor: 5.157

2.  Three clusters of conformational states in p450cam reveal a multistep pathway for closing of the substrate access channel.

Authors:  Young-Tae Lee; Edith C Glazer; Richard F Wilson; C David Stout; David B Goodin
Journal:  Biochemistry       Date:  2011-01-11       Impact factor: 3.162

3.  Structural insight into the expanded PCB-degrading abilities of a biphenyl dioxygenase obtained by directed evolution.

Authors:  Pravindra Kumar; Mahmood Mohammadi; Jean-François Viger; Diane Barriault; Leticia Gomez-Gil; Lindsay D Eltis; Jeffrey T Bolin; Michel Sylvestre
Journal:  J Mol Biol       Date:  2010-11-10       Impact factor: 5.469

4.  Two-dimensional NMR and all-atom molecular dynamics of cytochrome P450 CYP119 reveal hidden conformational substates.

Authors:  Jed N Lampe; Relly Brandman; Santhosh Sivaramakrishnan; Paul R Ortiz de Montellano
Journal:  J Biol Chem       Date:  2010-01-22       Impact factor: 5.157

5.  Investigating the structural plasticity of a cytochrome P450: three-dimensional structures of P450 EryK and binding to its physiological substrate.

Authors:  Carmelinda Savino; Linda C Montemiglio; Giuliano Sciara; Adriana E Miele; Steven G Kendrew; Per Jemth; Stefano Gianni; Beatrice Vallone
Journal:  J Biol Chem       Date:  2009-07-22       Impact factor: 5.157

Review 6.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

Review 7.  Nanodiscs in Membrane Biochemistry and Biophysics.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Chem Rev       Date:  2017-02-08       Impact factor: 60.622

8.  Substrate recognition by the multifunctional cytochrome P450 MycG in mycinamicin hydroxylation and epoxidation reactions.

Authors:  Shengying Li; Drew R Tietz; Florentine U Rutaganira; Petrea M Kells; Yojiro Anzai; Fumio Kato; Thomas C Pochapsky; David H Sherman; Larissa M Podust
Journal:  J Biol Chem       Date:  2012-09-05       Impact factor: 5.157

9.  Pathways of Metabolite-Related Damage to a Synthetic p53 Gene Exon 7 Oligonucleotide Using Magnetic Enzyme Bioreactor Beads and LC-MS/MS Sequencing.

Authors:  Spundana Malla; Karteek Kadimisetty; Di Jiang; Dharamainder Choudhary; James F Rusling
Journal:  Biochemistry       Date:  2018-05-23       Impact factor: 3.162

10.  Catalytic modulation of human cytochromes P450 17A1 and P450 11B2 by phospholipid.

Authors:  Hwei-Ming Peng; Chase Barlow; Richard J Auchus
Journal:  J Steroid Biochem Mol Biol       Date:  2018-03-13       Impact factor: 4.292

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