Literature DB >> 18275862

Proteomics and diagnostics: Let's Get Specific, again.

Dom Zichi1, Bruce Eaton, Britta Singer, Larry Gold.   

Abstract

DNA array technology has changed all discussions about proteomics. Whole genome arrays allow unbiased experimentation, and the surprises that flow from those approaches. 'Whole proteome' proteomics is not possible today, and might never be possible unless experiments are guided by careful evaluation of reagent specificity. In this paper we explore some possible ways to increase the content of proteomic analysis.

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Year:  2008        PMID： 18275862     DOI： 10.1016/j.cbpa.2008.01.016

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN： 1367-5931            Impact factor:   8.822


  31 in total

1.  The maternal plasma proteome changes as a function of gestational age in normal pregnancy: a longitudinal study.

Authors:  Roberto Romero; Offer Erez; Eli Maymon; Piya Chaemsaithong; Zhonghui Xu; Percy Pacora; Tinnakorn Chaiworapongsa; Bogdan Done; Sonia S Hassan; Adi L Tarca
Journal:  Am J Obstet Gynecol       Date:  2017-03-03       Impact factor: 8.661

2.  Bar-coded hydrogel microparticles for protein detection: synthesis, assay and scanning.

Authors:  David C Appleyard; Stephen C Chapin; Rathi L Srinivas; Patrick S Doyle
Journal:  Nat Protoc       Date:  2011-10-20       Impact factor: 13.491

3.  Fluorescence-activated cell sorting for aptamer SELEX with cell mixtures.

Authors:  Günter Mayer; Marie-Sophie L Ahmed; Andreas Dolf; Elmar Endl; Percy A Knolle; Michael Famulok
Journal:  Nat Protoc       Date:  2010-12-02       Impact factor: 13.491

4.  MALDI immunoscreening (MiSCREEN): a method for selection of anti-peptide monoclonal antibodies for use in immunoproteomics.

Authors:  Morteza Razavi; Matthew E Pope; Martin V Soste; Brett A Eyford; Angela M Jackson; N Leigh Anderson; Terry W Pearson
Journal:  J Immunol Methods       Date:  2010-11-13       Impact factor: 2.303

5.  Methylation potential associated with diet, genotype, protein, and metabolite levels in the Delta Obesity Vitamin Study.

Authors:  Jacqueline Pontes Monteiro; Carolyn Wise; Melissa J Morine; Candee Teitel; Lisa Pence; Anna Williams; Beverly McCabe-Sellers; Catherine Champagne; Jerome Turner; Beatrice Shelby; Baitang Ning; Joan Oguntimein; Lauren Taylor; Terri Toennessen; Corrado Priami; Richard D Beger; Margaret Bogle; Jim Kaput
Journal:  Genes Nutr       Date:  2014-04-24       Impact factor: 5.523

6.  Multiplexed homogeneous proximity ligation assays for high-throughput protein biomarker research in serological material.

Authors:  Martin Lundberg; Stine Buch Thorsen; Erika Assarsson; Andrea Villablanca; Bonnie Tran; Nick Gee; Mick Knowles; Birgitte Sander Nielsen; Eduardo González Couto; Roberto Martin; Olle Nilsson; Christian Fermer; Jörg Schlingemann; Ib Jarle Christensen; Hans-Jorgen Nielsen; Björn Ekström; Claes Andersson; Mats Gustafsson; Nils Brunner; Jan Stenvang; Simon Fredriksson
Journal:  Mol Cell Proteomics       Date:  2011-01-17       Impact factor: 5.911

Review 7.  Aptamers and the RNA world, past and present.

Authors:  Larry Gold; Nebojsa Janjic; Thale Jarvis; Dan Schneider; Jeffrey J Walker; Sheri K Wilcox; Dom Zichi
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-03-01       Impact factor: 10.005

Review 8.  Exploring avidity: understanding the potential gains in functional affinity and target residence time of bivalent and heterobivalent ligands.

Authors:  Georges Vauquelin; Steven J Charlton
Journal:  Br J Pharmacol       Date:  2013-04       Impact factor: 8.739

9.  Thermodynamic additivity of sequence variations: an algorithm for creating high affinity peptides without large libraries or structural information.

Authors:  Matthew P Greving; Paul E Belcher; Chris W Diehnelt; Maria J Gonzalez-Moa; Jack Emery; Jinglin Fu; Stephen Albert Johnston; Neal W Woodbury
Journal:  PLoS One       Date:  2010-11-11       Impact factor: 3.240

10.  Evolution of a histone H4-K16 acetyl-specific DNA aptamer.

Authors:  Berea A R Williams; Liyun Lin; Stuart M Lindsay; John C Chaput
Journal:  J Am Chem Soc       Date:  2009-05-13       Impact factor: 15.419
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