Literature DB >> 18272703

Detection of cytomegalovirus (CMV) DNA in EDTA whole-blood samples: evaluation of the quantitative artus CMV LightCycler PCR kit in conjunction with automated sample preparation.

Birgit D A Michelin1, Ita Hadzisejdic, Michael Bozic, Maja Grahovac, Markus Hess, Blazenka Grahovac, Egon Marth, Harald H Kessler.   

Abstract

Whole blood has been found to be a reliable matrix for the detection and quantitation of cytomegalovirus (CMV) DNA. In this study, the performance of the artus CMV LightCycler (LC) PCR kit in conjunction with automated sample preparation on a BioRobot EZ1 workstation was evaluated. The accuracy, linearity, analytical sensitivity, and inter- and intra-assay variations were determined. A total of 102 clinical EDTA whole-blood samples were investigated, and results were compared with those obtained with the in vitro diagnostics (IVD)/Conformité Européene (CE)-labeled CMV HHV6,7,8 R-gene quantification kit. When the accuracy of the new kit was tested, seven of eight results were found to be within +/-0.5 log(10) unit of the expected panel results. Determination of linearity resulted in a quasilinear curve over more than 5 log units. The lower limit of detection of the assay was determined to be 139 copies/ml in EDTA whole blood. The interassay variation ranged from 15 to 58%, and the intra-assay variation ranged from 7 to 35%. When clinical samples were tested and the results were compared with those of the routinely used IVD/CE-labeled assay, 53 samples tested positive and 13 samples tested negative by both of the assays. One sample was found to be positive with the artus CMV LC PCR kit only, and 35 samples tested positive with the routinely used assay only. The majority of discrepant results were found with low-titer samples. In conclusion, use of the artus CMV LC PCR kit in conjunction with automated sample preparation on the BioRobot EZ1 workstation may be suitable for the detection and quantitation of CMV DNA in EDTA whole blood in the routine low-throughput laboratory; however, low-positive results may be missed by this assay.

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Year:  2008        PMID: 18272703      PMCID: PMC2292973          DOI: 10.1128/JCM.01403-07

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  15 in total

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Authors:  I G Sia; J A Wilson; M J Espy; C V Paya; T F Smith
Journal:  J Clin Microbiol       Date:  2000-02       Impact factor: 5.948

2.  Management of CMV infections: recommendations from the infectious diseases working party of the EBMT.

Authors:  P Ljungman; P Reusser; R de la Camara; H Einsele; D Engelhard; P Ribaud; K Ward
Journal:  Bone Marrow Transplant       Date:  2004-06       Impact factor: 5.483

3.  Optimization of quantitative detection of cytomegalovirus DNA in plasma by real-time PCR.

Authors:  Michael Boeckh; MeeiLi Huang; James Ferrenberg; Terry Stevens-Ayers; Laurence Stensland; W Garrett Nichols; Lawrence Corey
Journal:  J Clin Microbiol       Date:  2004-03       Impact factor: 5.948

4.  Evaluation of real-time PCR laboratory-developed tests using analyte-specific reagents for cytomegalovirus quantification.

Authors:  Angela M Caliendo; Jessica Ingersoll; Andrea M Fox-Canale; Sabine Pargman; Tameka Bythwood; Mary K Hayden; James W Bremer; Nell S Lurain
Journal:  J Clin Microbiol       Date:  2007-04-04       Impact factor: 5.948

5.  Molecular methods for cytomegalovirus surveillance in bone marrow transplant recipients.

Authors:  Adriana Weinberg; Debra Schissel; Roger Giller
Journal:  J Clin Microbiol       Date:  2002-11       Impact factor: 5.948

Review 6.  Cytomegalovirus infection in immunocompetent and immunocompromised individuals--a review.

Authors:  Z Vancíková; P Dvorák
Journal:  Curr Drug Targets Immune Endocr Metabol Disord       Date:  2001-08

7.  Significance of qualitative PCR detection method for preemptive therapy of cytomegalovirus infection in patients after allogeneic hematopoietic stem cell transplantation -- single-centre experience.

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Review 8.  Prevention of cytomegalovirus disease in recipients of allogeneic stem cell transplants.

Authors:  Ellen Meijer; Greet J Boland; Leo F Verdonck
Journal:  Clin Microbiol Rev       Date:  2003-10       Impact factor: 26.132

9.  Rapid quantification of hepatitis B virus DNA by automated sample preparation and real-time PCR.

Authors:  Evelyn Stelzl; Zsofia Muller; Egon Marth; Harald H Kessler
Journal:  J Clin Microbiol       Date:  2004-06       Impact factor: 5.948

10.  Automated extraction and quantification of human cytomegalovirus DNA in whole blood by real-time PCR assay.

Authors:  C Mengelle; K Sandres-Sauné; C Pasquier; L Rostaing; J-M Mansuy; M Marty; I Da Silva; M Attal; P Massip; J Izopet
Journal:  J Clin Microbiol       Date:  2003-08       Impact factor: 5.948

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  9 in total

1.  Rapid quantitation of cytomegalovirus DNA in whole blood by a new molecular assay based on automated sample preparation and real-time PCR.

Authors:  Reinhard B Raggam; Michael Bozic; Helmut J F Salzer; Sandra Hammerschmidt; Cordula Homberg; Katharina Ruzicka; Harald H Kessler
Journal:  Med Microbiol Immunol       Date:  2010-06-18       Impact factor: 3.402

2.  Comparative evaluation of a commercially available automated system for extraction of viral DNA from whole blood: application to monitoring of epstein-barr virus and cytomegalovirus load.

Authors:  Sylvie Pillet; Thomas Bourlet; Bruno Pozzetto
Journal:  J Clin Microbiol       Date:  2009-08-26       Impact factor: 5.948

3.  Comparison of QIAsymphony automated and QIAamp manual DNA extraction systems for measuring Epstein-Barr virus DNA load in whole blood using real-time PCR.

Authors:  Stella Laus; Lawrence A Kingsley; Michael Green; Robert M Wadowsky
Journal:  J Mol Diagn       Date:  2011-09-01       Impact factor: 5.568

4.  Comparison of an automated nucleic acid extraction system with the column-based procedure.

Authors:  Hagen Frickmann; Rebecca Hinz; Ralf Matthias Hagen
Journal:  Eur J Microbiol Immunol (Bp)       Date:  2015-03-26

5.  Comparative evaluation of three automated systems for DNA extraction in conjunction with three commercially available real-time PCR assays for quantitation of plasma Cytomegalovirus DNAemia in allogeneic stem cell transplant recipients.

Authors:  Dayana Bravo; María Ángeles Clari; Elisa Costa; Beatriz Muñoz-Cobo; Carlos Solano; María José Remigia; David Navarro
Journal:  J Clin Microbiol       Date:  2011-06-22       Impact factor: 5.948

6.  Torque teno virus viremia load size in patients with selected congenital defects of innate immunity.

Authors:  Fabrizio Maggi; Massimo Pifferi; Angela Michelucci; Melania Albani; Selenia Sbranti; Letizia Lanini; Paolo Simi; Pierantonio Macchia; Mauro Pistello; Mauro Bendinelli
Journal:  Clin Vaccine Immunol       Date:  2011-02-16

7.  Fully automated quantification of cytomegalovirus (CMV) in whole blood with the new sensitive Abbott RealTime CMV assay in the era of the CMV international standard.

Authors:  Nathalie Schnepf; Catherine Scieux; Matthieu Resche-Riggon; Linda Feghoul; Alienor Xhaard; Sébastien Gallien; Jean-Michel Molina; Gérard Socié; Denis Viglietti; François Simon; Marie-Christine Mazeron; Jérôme Legoff
Journal:  J Clin Microbiol       Date:  2013-04-24       Impact factor: 5.948

8.  Comparative evaluation of the QIAsymphony RGQ system with the easyMAG/R-gene combination for the quantitation of cytomegalovirus DNA load in whole blood.

Authors:  Sylvie Pillet; Thomas Bourlet; Bruno Pozzetto
Journal:  Virol J       Date:  2012-10-09       Impact factor: 4.099

Review 9.  Current concepts in the prevention of pathogen transmission via blood/plasma-derived products for bleeding disorders.

Authors:  Giovanni Di Minno; Carlo Federico Perno; Andreas Tiede; David Navarro; Mariana Canaro; Lutz Güertler; James W Ironside
Journal:  Blood Rev       Date:  2015-07-20       Impact factor: 8.250

  9 in total

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