Literature DB >> 18268845

A role for RNAi in heterochromatin formation in Drosophila.

Nicole C Riddle1, Sarah C R Elgin.   

Abstract

Heterochromatin is a specialized form of DNA packaging that results in a transcriptionally inactive conformation. While much progress has been made in characterizing the heterochromatin structure biochemically and via its effects on genes and transgenes, very little is known about how heterochromatin formation is initiated. Recent evidence from the yeast Saccharomyces pombe suggests the involvement of the RNA interference (RNAi) machinery in heterochromatin formation, and in particular in the targeting of the heterochromatin machinery to specific sites in the genome. In this article, we review the evidence for an involvement of RNAi in heterochromatin formation in the model system Drosophila melanogaster. It appears that while there are numerous threads that connect heterochromatin formation and gene silencing with the RNAi pathways in Drosophila, a direct role for RNAi in particular in the targeting of heterochromatin formation is still lacking.

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Year:  2008        PMID: 18268845     DOI: 10.1007/978-3-540-75157-1_9

Source DB:  PubMed          Journal:  Curr Top Microbiol Immunol        ISSN: 0070-217X            Impact factor:   4.291


  11 in total

1.  Cell cycle regulated transcription of heterochromatin in mammals vs. fission yeast: functional conservation or coincidence?

Authors:  Junjie Lu; David M Gilbert
Journal:  Cell Cycle       Date:  2008-04-29       Impact factor: 4.534

2.  The Drosophila gene disruption project: progress using transposons with distinctive site specificities.

Authors:  Hugo J Bellen; Robert W Levis; Yuchun He; Joseph W Carlson; Martha Evans-Holm; Eunkyung Bae; Jaeseob Kim; Athanasios Metaxakis; Charalambos Savakis; Karen L Schulze; Roger A Hoskins; Allan C Spradling
Journal:  Genetics       Date:  2011-04-21       Impact factor: 4.562

Review 3.  Different means, same end-heterochromatin formation by RNAi and RNAi-independent RNA processing factors in fission yeast.

Authors:  Francisca E Reyes-Turcu; Shiv Is Grewal
Journal:  Curr Opin Genet Dev       Date:  2012-01-11       Impact factor: 5.578

4.  Protein complex of Drosophila ATRX/XNP and HP1a is required for the formation of pericentric beta-heterochromatin in vivo.

Authors:  Alexander V Emelyanov; Alexander Y Konev; Elena Vershilova; Dmitry V Fyodorov
Journal:  J Biol Chem       Date:  2010-02-13       Impact factor: 5.157

Review 5.  A lot about a little dot - lessons learned from Drosophila melanogaster chromosome 4.

Authors:  Nicole C Riddle; Christopher D Shaffer; Sarah C R Elgin
Journal:  Biochem Cell Biol       Date:  2009-02       Impact factor: 3.626

Review 6.  Role of chromatin states in transcriptional memory.

Authors:  Sharmistha Kundu; Craig L Peterson
Journal:  Biochim Biophys Acta       Date:  2009-02-21

7.  Enrichment of HP1a on Drosophila chromosome 4 genes creates an alternate chromatin structure critical for regulation in this heterochromatic domain.

Authors:  Nicole C Riddle; Youngsook L Jung; Tingting Gu; Artyom A Alekseyenko; Dalal Asker; Hongxing Gui; Peter V Kharchenko; Aki Minoda; Annette Plachetka; Yuri B Schwartz; Michael Y Tolstorukov; Mitzi I Kuroda; Vincenzo Pirrotta; Gary H Karpen; Peter J Park; Sarah C R Elgin
Journal:  PLoS Genet       Date:  2012-09-20       Impact factor: 5.917

8.  Genome mapping and characterization of the Anopheles gambiae heterochromatin.

Authors:  Maria V Sharakhova; Phillip George; Irina V Brusentsova; Scotland C Leman; Jeffrey A Bailey; Christopher D Smith; Igor V Sharakhov
Journal:  BMC Genomics       Date:  2010-08-04       Impact factor: 3.969

9.  Dicer is associated with ribosomal DNA chromatin in mammalian cells.

Authors:  Lasse Sinkkonen; Tabea Hugenschmidt; Witold Filipowicz; Petr Svoboda
Journal:  PLoS One       Date:  2010-08-13       Impact factor: 3.240

10.  Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans.

Authors:  Maartje J Luteijn; Petra van Bergeijk; Lucas J T Kaaij; Miguel Vasconcelos Almeida; Elke F Roovers; Eugene Berezikov; René F Ketting
Journal:  EMBO J       Date:  2012-07-31       Impact factor: 11.598

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