Literature DB >> 18263749

Differences in carotenoid composition among hymenobacter and related strains support a tree-like model of carotenoid evolution.

Jonathan L Klassen1, Julia M Foght.   

Abstract

Carotenoids are structurally diverse pigments of biotechnological interest as natural colorants and in the prevention of human disease. The carotenoids present in 19 strains taxonomically related to the poorly described, nonphotosynthetic bacterial genus Hymenobacter, including 10 novel isolates cultivated from Victoria Upper Glacier, Antarctica, were characterized using high-performance liquid chromatography (HPLC). Nine chemically distinct carotenoids, present in various combinations irresolvable by conventional crude spectrophotometric analyses, were purified by preparative HPLC and characterized using UV-visible light absorption spectroscopy and high-resolution mass spectrometry. All major Hymenobacter carotenoids appear to be derived from a common backbone of 2'-hydroxyflexixanthin and include previously unreported presumptive hexosyl, pentosyl, and methyl derivatives. Their distribution does not, however, correlate perfectly with 16S rRNA gene phylogeny. Carotenoid composition, therefore, may be strain specific and does not follow a strictly homogeneous pattern of vertical evolutionary descent.

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Year:  2008        PMID: 18263749      PMCID: PMC2292609          DOI: 10.1128/AEM.02306-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  37 in total

1.  Cultivation-independent and -dependent characterization of Bacteria resident beneath John Evans Glacier.

Authors:  Stephanie M Cheng; Julia M Foght
Journal:  FEMS Microbiol Ecol       Date:  2007-02       Impact factor: 4.194

2.  A carotenoid synthesis gene cluster from Algoriphagus sp. KK10202C with a novel fusion-type lycopene beta-cyclase gene.

Authors:  Luan Tao; Henry Yao; Hiroaki Kasai; Norihiko Misawa; Qiong Cheng
Journal:  Mol Genet Genomics       Date:  2006-04-20       Impact factor: 3.291

Review 3.  Outdoor cultivation of microalgae for carotenoid production: current state and perspectives.

Authors:  José A Del Campo; Mercedes García-González; Miguel G Guerrero
Journal:  Appl Microbiol Biotechnol       Date:  2007-02-03       Impact factor: 4.813

4.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.

Authors:  J D Thompson; T J Gibson; F Plewniak; F Jeanmougin; D G Higgins
Journal:  Nucleic Acids Res       Date:  1997-12-15       Impact factor: 16.971

5.  Rare carotenoids, (3R)-saproxanthin and (3R,2'S)-myxol, isolated from novel marine bacteria (Flavobacteriaceae) and their antioxidative activities.

Authors:  Kazutoshi Shindo; Kana Kikuta; Atsuko Suzuki; Atsuko Katsuta; Hiroaki Kasai; Mina Yasumoto-Hirose; Yoshihide Matsuo; Norihiko Misawa; Shinichi Takaichi
Journal:  Appl Microbiol Biotechnol       Date:  2007-01-11       Impact factor: 4.813

Review 6.  The biotechnological potential and design of novel carotenoids by gene combination in Escherichia coli.

Authors:  G Sandmann; M Albrecht; G Schnurr; O Knörzer; P Böger
Journal:  Trends Biotechnol       Date:  1999-06       Impact factor: 19.536

7.  Proposal of Hymenobacter norwichensis sp. nov., classification of 'Taxeobacter ocellatus', 'Taxeobacter gelupurpurascens' and 'Taxeobacter chitinovorans' as Hymenobacter ocellatus sp. nov., Hymenobacter gelipurpurascens sp. nov. and Hymenobacter chitinivorans sp. nov., respectively, and emended description of the genus Hymenobacter Hirsch et al. 1999.

Authors:  Sandra Buczolits; Ewald B M Denner; Peter Kämpfer; Hans-Jürgen Busse
Journal:  Int J Syst Evol Microbiol       Date:  2006-09       Impact factor: 2.747

8.  Evaluation of the antioxidant effects of carotenoids from Deinococcus radiodurans through targeted mutagenesis, chemiluminescence, and DNA damage analyses.

Authors:  Bing Tian; Zhenjian Xu; Zongtao Sun; Jun Lin; Yuejin Hua
Journal:  Biochim Biophys Acta       Date:  2007-02-09

9.  Knockout of crtB or crtI gene blocks the carotenoid biosynthetic pathway in Deinococcus radiodurans R1 and influences its resistance to oxidative DNA-damaging agents due to change of free radicals scavenging ability.

Authors:  Lei Zhang; Qiao Yang; Xuesong Luo; Chengxiang Fang; Qiuju Zhang; Yali Tang
Journal:  Arch Microbiol       Date:  2007-06-01       Impact factor: 2.552

Review 10.  Carotenoids and human health.

Authors:  A V Rao; L G Rao
Journal:  Pharmacol Res       Date:  2007-01-25       Impact factor: 7.658

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  14 in total

1.  Characterization of Hymenobacter isolates from Victoria Upper Glacier, Antarctica reveals five new species and substantial non-vertical evolution within this genus.

Authors:  Jonathan L Klassen; Julia M Foght
Journal:  Extremophiles       Date:  2010-11-21       Impact factor: 2.395

2.  Searching for novel photolyases in UVC-resistant Antarctic bacteria.

Authors:  Juan José Marizcurrena; María A Morel; Victoria Braña; Danilo Morales; Wilner Martinez-López; Susana Castro-Sowinski
Journal:  Extremophiles       Date:  2017-02-11       Impact factor: 2.395

3.  Hymenobacter taeanensis sp. nov., radiation resistant bacterium isolated from coastal sand dune.

Authors:  Ji Hee Lee; Jong-Hyun Jung; Min-Kyu Kim; Han Na Choe; Sangyong Lim
Journal:  Antonie Van Leeuwenhoek       Date:  2021-07-22       Impact factor: 2.271

4.  Classification and identification of pigmented cocci bacteria relevant to the soil environment via Raman spectroscopy.

Authors:  Vinay Kumar; Bernd Kampe; Petra Rösch; Jürgen Popp
Journal:  Environ Sci Pollut Res Int       Date:  2015-05-05       Impact factor: 4.223

5.  Hymenobacter terrae sp. nov., a bacterium isolated from soil.

Authors:  Sathiyaraj Srinivasan; Jae-Jin Lee; Kyoung Ryun Park; Se-Hee Park; Hee-Young Jung; Myung Kyum Kim
Journal:  Curr Microbiol       Date:  2015-01-09       Impact factor: 2.188

6.  Biocontamination and diversity of epilithic bacteria and fungi colonising outdoor stone and mortar sculptures.

Authors:  Nádia C Silva; Ana R Madureira; Manuela Pintado; Patrícia R Moreira
Journal:  Appl Microbiol Biotechnol       Date:  2022-05-14       Impact factor: 4.813

7.  Hymenobacter cyanobacteriorum sp. nov., isolated from a freshwater reservoir during the cyanobacterial bloom period.

Authors:  Ve Van Le; So-Ra Ko; Mingyeong Kang; Hee-Mock Oh; Chi-Yong Ahn
Journal:  Arch Microbiol       Date:  2022-06-06       Impact factor: 2.667

8.  Phylogenetic and evolutionary patterns in microbial carotenoid biosynthesis are revealed by comparative genomics.

Authors:  Jonathan L Klassen
Journal:  PLoS One       Date:  2010-06-22       Impact factor: 3.240

9.  Microbial community structure, pigment composition, and nitrogen source of red snow in Antarctica.

Authors:  Masanori Fujii; Yoshinori Takano; Hisaya Kojima; Tamotsu Hoshino; Ryouichi Tanaka; Manabu Fukui
Journal:  Microb Ecol       Date:  2009-10-22       Impact factor: 4.552

10.  Phyllosphere Community Assembly and Response to Drought Stress on Common Tropical and Temperate Forage Grasses.

Authors:  Emily K Bechtold; Stephanie Ryan; Sarah E Moughan; Ravi Ranjan; Klaus Nüsslein
Journal:  Appl Environ Microbiol       Date:  2021-08-11       Impact factor: 4.792

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