Literature DB >> 18250623

The art and design of genetic screens: maize.

Héctor Candela1, Sarah Hake.   

Abstract

Maize (Zea mays) is an excellent model for basic research. Genetic screens have informed our understanding of developmental processes, meiosis, epigenetics and biochemical pathways--not only in maize but also in other cereal crops. We discuss the forward and reverse genetic screens that are possible in this organism, and emphasize the available tools. Screens exploit the well-studied behaviour of transposon systems, and the distinctive chromosomes allow an integration of cytogenetics into mutagenesis screens and analyses. The imminent completion of the maize genome sequence provides the essential resource to move seamlessly from gene to phenotype and back.

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Year:  2008        PMID: 18250623     DOI: 10.1038/nrg2291

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  24 in total

1.  An Ac transposon system based on maize chromosome 4S for isolating long-distance-transposed Ac tags in the maize genome.

Authors:  Fei Wang; Zhaoying Li; Jun Fan; Pengfei Li; Wei Hu; Gang Wang; Zhengkai Xu; Rentao Song
Journal:  Genetica       Date:  2010-11-20       Impact factor: 1.082

Review 2.  Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools.

Authors:  Marisa D Ruehle; Eduardo Orias; Chad G Pearson
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

3.  Strategies and tools to improve crop productivity by targeting photosynthesis.

Authors:  Michael L Nuccio; Laura Potter; Suzy M Stiegelmeyer; Joseph Curley; Jonathan Cohn; Peter E Wittich; Xiaoping Tan; Jimena Davis; Junjian Ni; Jon Trullinger; Rick Hall; Nicholas J Bate
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-26       Impact factor: 6.237

Review 4.  How important are transposons for plant evolution?

Authors:  Damon Lisch
Journal:  Nat Rev Genet       Date:  2013-01       Impact factor: 53.242

Review 5.  Using next-generation sequencing to isolate mutant genes from forward genetic screens.

Authors:  Korbinian Schneeberger
Journal:  Nat Rev Genet       Date:  2014-08-20       Impact factor: 53.242

6.  Mutagenomics: A Rapid, High-Throughput Method to Identify Causative Mutations from a Genetic Screen.

Authors:  Charles Hodgens; Nicole Chang; G Eric Schaller; Joseph J Kieber
Journal:  Plant Physiol       Date:  2020-09-04       Impact factor: 8.340

7.  BonnMu: A Sequence-Indexed Resource of Transposon-Induced Maize Mutations for Functional Genomics Studies.

Authors:  Caroline Marcon; Lena Altrogge; Yan Naing Win; Tyll Stöcker; Jack M Gardiner; John L Portwood; Nina Opitz; Annika Kortz; Jutta A Baldauf; Charles T Hunter; Donald R McCarty; Karen E Koch; Heiko Schoof; Frank Hochholdinger
Journal:  Plant Physiol       Date:  2020-08-07       Impact factor: 8.340

8.  Genetic Screens to Target Embryo and Endosperm Pathways in Arabidopsis and Maize.

Authors:  C Stewart Gillmor; A Mark Settles; Wolfgang Lukowitz
Journal:  Methods Mol Biol       Date:  2020

9.  Mu transposon insertion sites and meiotic recombination events co-localize with epigenetic marks for open chromatin across the maize genome.

Authors:  Sanzhen Liu; Cheng-Ting Yeh; Tieming Ji; Kai Ying; Haiyan Wu; Ho Man Tang; Yan Fu; Daniel Nettleton; Patrick S Schnable
Journal:  PLoS Genet       Date:  2009-11-20       Impact factor: 5.917

10.  Advances in maize genomics and their value for enhancing genetic gains from breeding.

Authors:  Yunbi Xu; Debra J Skinner; Huixia Wu; Natalia Palacios-Rojas; Jose Luis Araus; Jianbing Yan; Shibin Gao; Marilyn L Warburton; Jonathan H Crouch
Journal:  Int J Plant Genomics       Date:  2009-08-12
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