Literature DB >> 18250152

Artificial recruitment of mediator by the DNA-binding domain of Adr1 overcomes glucose repression of ADH2 expression.

Elton T Young1, Christine Tachibana, Hsin-Wen Ella Chang, Kenneth M Dombek, Erin M Arms, Rhiannon Biddick.   

Abstract

The transcription factor Adr1 activates numerous genes in nonfermentable carbon source metabolism. An unknown mechanism prevents Adr1 from stably binding to the promoters of these genes in glucose-grown cells. Glucose depletion leads to Snf1-dependent binding. Chromatin immunoprecipitation showed that the Adr1 DNA-binding domain could not be detected at the ADH2 promoter under conditions in which the binding of the full-length protein occurred. This suggested that an activation domain is required for stable binding, and coactivators may stabilize the interaction with the promoter. Artificial recruitment of Mediator tail subunits by fusion to the Adr1 DNA-binding domain overcame both the inhibition of promoter binding and glucose repression of ADH2 expression. In contrast, an Adr1 DNA-binding domain-Tbp fusion did not overcome glucose repression, although it was an efficient activator of ADH2 expression under derepressing conditions. When Mediator was artificially recruited, ADH2 expression was independent of SNF1, SAGA, and Swi/Snf, whereas ADH2 expression was dependent on these factors with wild-type Adr1. These results suggest that in the presence of glucose, the ADH2 promoter is accessible to Adr1 but that other interactions that occur when glucose is depleted do not take place. Artificial recruitment of Mediator appears to overcome this requirement and to allow stable binding and transcription under normally inhibitory conditions.

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Year:  2008        PMID: 18250152      PMCID: PMC2293114          DOI: 10.1128/MCB.00658-07

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  58 in total

1.  A regulatory shortcut between the Snf1 protein kinase and RNA polymerase II holoenzyme.

Authors:  S Kuchin; I Treich; M Carlson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-07-05       Impact factor: 11.205

2.  Hyperacetylation of chromatin at the ADH2 promoter allows Adr1 to bind in repressed conditions.

Authors:  Loredana Verdone; Jiansheng Wu; Kristen van Riper; Nataly Kacherovsky; Maria Vogelauer; Elton T Young; Michael Grunstein; Ernesto Di Mauro; Micaela Caserta
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

3.  The transcriptional activator Cat8p provides a major contribution to the reprogramming of carbon metabolism during the diauxic shift in Saccharomyces cerevisiae.

Authors:  V Haurie; M Perrot; T Mini; P Jenö; F Sagliocco; H Boucherie
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

4.  The TBP-inhibitory domain of TAF145 limits the effects of nonclassical transcriptional activators.

Authors:  Jason X Cheng; Julian Nevado; Zhen Lu; Mark Ptashne
Journal:  Curr Biol       Date:  2002-06-04       Impact factor: 10.834

5.  Artificial recruitment of TFIID, but not RNA polymerase II holoenzyme, activates transcription in mammalian cells.

Authors:  D R Dorris; K Struhl
Journal:  Mol Cell Biol       Date:  2000-06       Impact factor: 4.272

6.  The structural and functional organization of the yeast mediator complex.

Authors:  J S Kang; S H Kim; M S Hwang; S J Han; Y C Lee; Y J Kim
Journal:  J Biol Chem       Date:  2001-09-12       Impact factor: 5.157

7.  Artificially recruited TATA-binding protein fails to remodel chromatin and does not activate three promoters that require chromatin remodeling.

Authors:  M P Ryan; G A Stafford; L Yu; R H Morse
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

8.  Negative regulation of transcription by the yeast global transcription factors, Gal11 and Sin4.

Authors:  M Nishizawa
Journal:  Yeast       Date:  2001-09-15       Impact factor: 3.239

9.  Post-translational regulation of Adr1 activity is mediated by its DNA binding domain.

Authors:  J S Sloan; K M Dombek; E T Young
Journal:  J Biol Chem       Date:  1999-12-31       Impact factor: 5.157

10.  Connecting a promoter-bound protein to TBP bypasses the need for a transcriptional activation domain.

Authors:  S Chatterjee; K Struhl
Journal:  Nature       Date:  1995-04-27       Impact factor: 49.962

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  11 in total

1.  The transcriptional coactivators SAGA, SWI/SNF, and mediator make distinct contributions to activation of glucose-repressed genes.

Authors:  Rhiannon K Biddick; G Lynn Law; Kevin Khaw Beng Chin; Elton T Young
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

2.  Yeast 14-3-3 protein functions as a comodulator of transcription by inhibiting coactivator functions.

Authors:  Pabitra K Parua; Kenneth M Dombek; Elton T Young
Journal:  J Biol Chem       Date:  2014-10-29       Impact factor: 5.157

3.  Snf1 controls the activity of adr1 through dephosphorylation of Ser230.

Authors:  Sooraj Ratnakumar; Nataly Kacherovsky; Erin Arms; Elton T Young
Journal:  Genetics       Date:  2009-04-27       Impact factor: 4.562

Review 4.  Transcriptional regulation of nonfermentable carbon utilization in budding yeast.

Authors:  Bernard Turcotte; Xiao Bei Liang; François Robert; Nitnipa Soontorngun
Journal:  FEMS Yeast Res       Date:  2009-07-18       Impact factor: 2.796

5.  Snf1-Dependent Transcription Confers Glucose-Induced Decay upon the mRNA Product.

Authors:  Katherine A Braun; Kenneth M Dombek; Elton T Young
Journal:  Mol Cell Biol       Date:  2015-12-14       Impact factor: 4.272

Review 6.  The Mediator complex and transcription regulation.

Authors:  Zachary C Poss; Christopher C Ebmeier; Dylan J Taatjes
Journal:  Crit Rev Biochem Mol Biol       Date:  2013-10-03       Impact factor: 8.250

Review 7.  The metabolism beyond programmed cell death in yeast.

Authors:  Julia Ring; Cornelia Sommer; Didac Carmona-Gutierrez; Christoph Ruckenstuhl; Tobias Eisenberg; Frank Madeo
Journal:  Exp Cell Res       Date:  2012-03-27       Impact factor: 3.905

8.  Effects of glucose, ethanol and acetic acid on regulation of ADH2 gene from Lachancea fermentati.

Authors:  Norhayati Yaacob; Mohd Shukuri Mohamad Ali; Abu Bakar Salleh; Nor Aini Abdul Rahman
Journal:  PeerJ       Date:  2016-03-10       Impact factor: 2.984

9.  Beta Cell Formation in vivo Through Cellular Networking, Integration and Processing (CNIP) in Wild Type Adult Mice.

Authors:  Bruno Doiron; Wenchao Hu; Ralph A DeFronzo
Journal:  Curr Pharm Biotechnol       Date:  2016       Impact factor: 2.837

10.  Promoter binding by the Adr1 transcriptional activator may be regulated by phosphorylation in the DNA-binding region.

Authors:  Nataly Kacherovsky; Christine Tachibana; Emily Amos; David Fox; Elton T Young
Journal:  PLoS One       Date:  2008-09-15       Impact factor: 3.240

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