Literature DB >> 18247046

Characterization of plant XRCC1 and its interaction with proliferating cell nuclear antigen.

Yukinobu Uchiyama1, Yuko Suzuki, Kengo Sakaguchi.   

Abstract

In plants, there are no DNA polymerase beta (Pol beta) and DNA ligase III (Lig3) genes. Thus, the plant short-patch base excision repair (short-patch BER) pathway must differ considerably from that in mammals. We characterized the rice (Oryza Sativa L. cv. Nipponbare) homologue of the mammalian X-ray repair cross complementing 1 (XRCC1), a well-known BER protein. The plant XRCC1 lacks the N-terminal domain (NTD) which is required for Pol beta binding and is essential for mammalian cell survival. The recombinant rice XRCC1 (OsXRCC1) protein binds single-stranded DNA (ssDNA) as well as double-stranded DNA (dsDNA) and also interacts with rice proliferating cell nuclear antigen (OsPCNA) in a pull-down assay. Through immunoprecipitation, we demonstrated that OsXRCC1 forms a complex with PCNA in vivo. OsXRCC1 mRNA was expressed in all rice organs and was induced by application of bleomycin, but not of MMS, H(2)O(2) or UV-B. Bleomycin also increased the fraction of OsXRCC1 associated with chromatin. These results suggest that OsXRCC1 contributes to DNA repair pathways that differ from the mammalian BER system.

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Year:  2008        PMID: 18247046     DOI: 10.1007/s00425-008-0695-3

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  36 in total

1.  Solution structure of the single-strand break repair protein XRCC1 N-terminal domain.

Authors:  A Marintchev; M A Mullen; M W Maciejewski; B Pan; M R Gryk; G P Mullen
Journal:  Nat Struct Biol       Date:  1999-09

Review 2.  The mechanism of switching among multiple BER pathways.

Authors:  E Dogliotti; P Fortini; B Pascucci; E Parlanti
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2001

Review 3.  XRCC1 and DNA strand break repair.

Authors:  Keith W Caldecott
Journal:  DNA Repair (Amst)       Date:  2003-09-18

Review 4.  DNA repair in plants.

Authors:  Seisuke Kimura; Kengo Sakaguchi
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

5.  A CHO-cell strain having hypersensitivity to mutagens, a defect in DNA strand-break repair, and an extraordinary baseline frequency of sister-chromatid exchange.

Authors:  L H Thompson; K W Brookman; L E Dillehay; A V Carrano; J A Mazrimas; C L Mooney; J L Minkler
Journal:  Mutat Res       Date:  1982-08       Impact factor: 2.433

6.  Pre-steady-state kinetic characterization of the AP endonuclease activity of human AP endonuclease 1.

Authors:  Robyn L Maher; Linda B Bloom
Journal:  J Biol Chem       Date:  2007-08-26       Impact factor: 5.157

7.  Dissociation of DNA polymerase alpha-primase complex during meiosis in Coprinus cinereus.

Authors:  Satoshi Namekawa; Fumika Hamada; Tomoyuki Sawado; Satomi Ishii; Takayuki Nara; Takashi Ishizaki; Takashi Ohuchi; Takao Arai; Kengo Sakaguchi
Journal:  Eur J Biochem       Date:  2003-05

8.  An interaction between the mammalian DNA repair protein XRCC1 and DNA ligase III.

Authors:  K W Caldecott; C K McKeown; J D Tucker; S Ljungquist; L H Thompson
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

9.  DNA repair in higher plants; photoreactivation is the major DNA repair pathway in non-proliferating cells while excision repair (nucleotide excision repair and base excision repair) is active in proliferating cells.

Authors:  Seisuke Kimura; Yasue Tahira; Toyotaka Ishibashi; Yoko Mori; Toshio Mori; Junji Hashimoto; Kengo Sakaguchi
Journal:  Nucleic Acids Res       Date:  2004-05-18       Impact factor: 16.971

10.  XRCC1 is required for DNA single-strand break repair in human cells.

Authors:  Reto Brem; Janet Hall
Journal:  Nucleic Acids Res       Date:  2005-05-02       Impact factor: 16.971

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  5 in total

Review 1.  Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.

Authors:  Alma Balestrazzi; Massimo Confalonieri; Anca Macovei; Mattia Donà; Daniela Carbonera
Journal:  Plant Cell Rep       Date:  2010-12-19       Impact factor: 4.570

2.  Poly(ADP-ribose)polymerases are involved in microhomology mediated back-up non-homologous end joining in Arabidopsis thaliana.

Authors:  Qi Jia; Amke den Dulk-Ras; Hexi Shen; Paul J J Hooykaas; Sylvia de Pater
Journal:  Plant Mol Biol       Date:  2013-04-28       Impact factor: 4.076

3.  The DNA repair protein XRCC1 functions in the plant DNA demethylation pathway by stimulating cytosine methylation (5-meC) excision, gap tailoring, and DNA ligation.

Authors:  María Isabel Martínez-Macías; Dolores Córdoba-Cañero; Rafael R Ariza; Teresa Roldán-Arjona
Journal:  J Biol Chem       Date:  2013-01-11       Impact factor: 5.157

4.  Arabidopsis DNA polymerase lambda mutant is mildly sensitive to DNA double strand breaks but defective in integration of a transgene.

Authors:  Tomoyuki Furukawa; Karel J Angelis; Anne B Britt
Journal:  Front Plant Sci       Date:  2015-05-27       Impact factor: 5.753

5.  Linear Energy Transfer-Dependent Change in Rice Gene Expression Profile after Heavy-Ion Beam Irradiation.

Authors:  Kotaro Ishii; Yusuke Kazama; Ryouhei Morita; Tomonari Hirano; Tokihiro Ikeda; Sachiko Usuda; Yoriko Hayashi; Sumie Ohbu; Ritsuko Motoyama; Yoshiaki Nagamura; Tomoko Abe
Journal:  PLoS One       Date:  2016-07-27       Impact factor: 3.240

  5 in total

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