Literature DB >> 18245441

The search for alternative splicing regulators: new approaches offer a path to a splicing code.

Charles J David1, James L Manley.   

Abstract

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Year:  2008        PMID： 18245441      PMCID： PMC2731647          DOI： 10.1101/gad.1643108

Source DB:  PubMed          Journal:  Genes Dev        ISSN： 0890-9369            Impact factor:   11.361


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  46 in total

1.  Expressing the human genome.

Authors:  R Tupler; G Perini; M R Green
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

Review 2.  Alternative pre-mRNA splicing: the logic of combinatorial control.

Authors:  C W Smith; J Valcárcel
Journal:  Trends Biochem Sci       Date:  2000-08       Impact factor: 13.807

Review 3.  Sorting out the complexity of SR protein functions.

Authors:  B R Graveley
Journal:  RNA       Date:  2000-09       Impact factor: 4.942

4.  Direct coupling of transcription and mRNA processing through the thermogenic coactivator PGC-1.

Authors:  M Monsalve; Z Wu; G Adelmant; P Puigserver; M Fan; B M Spiegelman
Journal:  Mol Cell       Date:  2000-08       Impact factor: 17.970

5.  The RNA-binding protein TIA-1 is a novel mammalian splicing regulator acting through intron sequences adjacent to a 5' splice site.

Authors:  F Del Gatto-Konczak; C F Bourgeois; C Le Guiner; L Kister; M C Gesnel; J Stévenin; R Breathnach
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

6.  STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo.

Authors:  Genta Ohno; Masatoshi Hagiwara; Hidehito Kuroyanagi
Journal:  Genes Dev       Date:  2008-01-29       Impact factor: 11.361

7.  The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing.

Authors:  A N Ladd; N Charlet; T A Cooper
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

8.  The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing.

Authors:  P Förch; O Puig; N Kedersha; C Martínez; S Granneman; B Séraphin; P Anderson; J Valcárcel
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

9.  Nova-1 regulates neuron-specific alternative splicing and is essential for neuronal viability.

Authors:  K B Jensen; B K Dredge; G Stefani; R Zhong; R J Buckanovich; H J Okano; Y Y Yang; R B Darnell
Journal:  Neuron       Date:  2000-02       Impact factor: 17.173

10.  Cooperative assembly of an hnRNP complex induced by a tissue-specific homolog of polypyrimidine tract binding protein.

Authors:  V Markovtsov; J M Nikolic; J A Goldman; C W Turck; M Y Chou; D L Black
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272
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  29 in total

1.  An antisense microwalk reveals critical role of an intronic position linked to a unique long-distance interaction in pre-mRNA splicing.

Authors:  Natalia N Singh; Katrin Hollinger; Dhruva Bhattacharya; Ravindra N Singh
Journal:  RNA       Date:  2010-04-22       Impact factor: 4.942

2.  Visualization and genetic analysis of alternative splicing regulation in vivo using fluorescence reporters in transgenic Caenorhabditis elegans.

Authors:  Hidehito Kuroyanagi; Genta Ohno; Hiroaki Sakane; Hiroyuki Maruoka; Masatoshi Hagiwara
Journal:  Nat Protoc       Date:  2010-08-05       Impact factor: 13.491

3.  TIA1 prevents skipping of a critical exon associated with spinal muscular atrophy.

Authors:  Natalia N Singh; Joonbae Seo; Eric W Ottesen; Maria Shishimorova; Dhruva Bhattacharya; Ravindra N Singh
Journal:  Mol Cell Biol       Date:  2010-12-28       Impact factor: 4.272

Review 4.  Alternative splicing of T-box transcription factor genes.

Authors:  Paige DeBenedittis; Kai Jiao
Journal:  Biochem Biophys Res Commun       Date:  2011-08-11       Impact factor: 3.575

5.  Expression analysis of a heat-inducible, Myo-inositol-1-phosphate synthase (MIPS) gene from wheat and the alternatively spliced variants of rice and Arabidopsis.

Authors:  Neetika Khurana; Harsh Chauhan; Paramjit Khurana
Journal:  Plant Cell Rep       Date:  2011-10-05       Impact factor: 4.570

Review 6.  Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches.

Authors:  Mo Chen; James L Manley
Journal:  Nat Rev Mol Cell Biol       Date:  2009-09-23       Impact factor: 94.444

7.  ESRP1 and ESRP2 are epithelial cell-type-specific regulators of FGFR2 splicing.

Authors:  Claude C Warzecha; Trey K Sato; Behnam Nabet; John B Hogenesch; Russ P Carstens
Journal:  Mol Cell       Date:  2009-03-13       Impact factor: 17.970

8.  Defining the regulatory network of the tissue-specific splicing factors Fox-1 and Fox-2.

Authors:  Chaolin Zhang; Zuo Zhang; John Castle; Shuying Sun; Jason Johnson; Adrian R Krainer; Michael Q Zhang
Journal:  Genes Dev       Date:  2008-09-15       Impact factor: 11.361

9.  A short antisense oligonucleotide masking a unique intronic motif prevents skipping of a critical exon in spinal muscular atrophy.

Authors:  Natalia N Singh; Maria Shishimorova; Lu Cheng Cao; Laxman Gangwani; Ravindra N Singh
Journal:  RNA Biol       Date:  2009-07-14       Impact factor: 4.652

Review 10.  Fox-1 family of RNA-binding proteins.

Authors:  Hidehito Kuroyanagi
Journal:  Cell Mol Life Sci       Date:  2009-12       Impact factor: 9.261
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