Literature DB >> 18233494

Relating neural dynamics to neural coding.

G Bard Ermentrout1, Roberto F Galán, Nathaniel N Urban.   

Abstract

We demonstrate that two key theoretical objects used widely in computational neuroscience, the phase-resetting curve (PRC) from dynamics and the spike triggered average (STA) from statistical analysis, are closely related when neurons fire in a nearly regular manner and the stimulus is sufficiently small. We prove that the STA due to injected noisy current is proportional to the derivative of the PRC. We compare these analytic results with numerical calculations for the Hodgkin-Huxley neuron and we apply the method to neurons in the olfactory bulb of mice. This observation allows us to relate the stimulus-response properties of a neuron to its dynamics, bridging the gap between dynamical and information theoretic approaches to understanding brain computations and facilitating the interpretation of changes in channels and other cellular properties as influencing the representation of stimuli.

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Year:  2007        PMID: 18233494      PMCID: PMC2533709          DOI: 10.1103/PhysRevLett.99.248103

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  14 in total

1.  Computation in a single neuron: Hodgkin and Huxley revisited.

Authors:  Blaise Agüera y Arcas; Adrienne L Fairhall; William Bialek
Journal:  Neural Comput       Date:  2003-08       Impact factor: 2.026

2.  On the phase reduction and response dynamics of neural oscillator populations.

Authors:  Eric Brown; Jeff Moehlis; Philip Holmes
Journal:  Neural Comput       Date:  2004-04       Impact factor: 2.026

3.  Synchronization in hybrid neuronal networks of the hippocampal formation.

Authors:  Theoden I Netoff; Matthew I Banks; Alan D Dorval; Corey D Acker; Julie S Haas; Nancy Kopell; John A White
Journal:  J Neurophysiol       Date:  2004-11-03       Impact factor: 2.714

4.  Phase-response curves give the responses of neurons to transient inputs.

Authors:  Boris S Gutkin; G Bard Ermentrout; Alex D Reyes
Journal:  J Neurophysiol       Date:  2005-04-13       Impact factor: 2.714

5.  Phase resetting curves and oscillatory stability in interneurons of rat somatosensory cortex.

Authors:  T Tateno; H P C Robinson
Journal:  Biophys J       Date:  2007-01-15       Impact factor: 4.033

6.  The spike-triggered average of the integrate-and-fire cell driven by gaussian white noise.

Authors:  Liam Paninski
Journal:  Neural Comput       Date:  2006-11       Impact factor: 2.026

7.  Noise-induced synchronization and clustering in ensembles of uncoupled limit-cycle oscillators.

Authors:  Hiroya Nakao; Kensuke Arai; Yoji Kawamura
Journal:  Phys Rev Lett       Date:  2007-05-02       Impact factor: 9.161

8.  Neuronal oscillators in aplysia californica that demonstrate weak coupling in vitro.

Authors:  Amanda J Preyer; Robert J Butera
Journal:  Phys Rev Lett       Date:  2005-09-23       Impact factor: 9.161

9.  Functional identification of the input-output transforms of motoneurones in the rat and cat.

Authors:  A V Poliakov; R K Powers; M D Binder
Journal:  J Physiol       Date:  1997-10-15       Impact factor: 5.182

10.  Effects of transient depolarizing potentials on the firing rate of cat neocortical neurons.

Authors:  A D Reyes; E E Fetz
Journal:  J Neurophysiol       Date:  1993-05       Impact factor: 2.714

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  31 in total

1.  Sensory coding in oscillatory electroreceptors of paddlefish.

Authors:  Alexander B Neiman; David F Russell
Journal:  Chaos       Date:  2011-12       Impact factor: 3.642

2.  A-current and type I/type II transition determine collective spiking from common input.

Authors:  Andrea K Barreiro; Evan L Thilo; Eric Shea-Brown
Journal:  J Neurophysiol       Date:  2012-06-06       Impact factor: 2.714

3.  Spectral reconstruction of phase response curves reveals the synchronization properties of mouse globus pallidus neurons.

Authors:  Joshua A Goldberg; Jeremy F Atherton; D James Surmeier
Journal:  J Neurophysiol       Date:  2013-08-21       Impact factor: 2.714

4.  The h channel mediates location dependence and plasticity of intrinsic phase response in rat hippocampal neurons.

Authors:  Rishikesh Narayanan; Daniel Johnston
Journal:  J Neurosci       Date:  2008-05-28       Impact factor: 6.167

5.  Frequency-dependent entrainment of striatal fast-spiking interneurons.

Authors:  Matthew H Higgs; Charles J Wilson
Journal:  J Neurophysiol       Date:  2019-07-17       Impact factor: 2.714

6.  Intrinsic heterogeneity in oscillatory dynamics limits correlation-induced neural synchronization.

Authors:  Shawn D Burton; G Bard Ermentrout; Nathaniel N Urban
Journal:  J Neurophysiol       Date:  2012-07-18       Impact factor: 2.714

Review 7.  Neurons as oscillators.

Authors:  Klaus M Stiefel; G Bard Ermentrout
Journal:  J Neurophysiol       Date:  2016-09-28       Impact factor: 2.714

8.  Effect of Phase Response Curve Shape and Synaptic Driving Force on Synchronization of Coupled Neuronal Oscillators.

Authors:  Ramana Dodla; Charles J Wilson
Journal:  Neural Comput       Date:  2017-05-31       Impact factor: 2.026

9.  A new approach for determining phase response curves reveals that Purkinje cells can act as perfect integrators.

Authors:  Elena Phoka; Hermann Cuntz; Arnd Roth; Michael Häusser
Journal:  PLoS Comput Biol       Date:  2010-04-29       Impact factor: 4.475

10.  A comparison of methods to determine neuronal phase-response curves.

Authors:  Benjamin Torben-Nielsen; Marylka Uusisaari; Klaus M Stiefel
Journal:  Front Neuroinform       Date:  2010-03-22       Impact factor: 4.081

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