Literature DB >> 14511510

Computation in a single neuron: Hodgkin and Huxley revisited.

Blaise Agüera y Arcas1, Adrienne L Fairhall, William Bialek.   

Abstract

A spiking neuron "computes" by transforming a complex dynamical input into a train of action potentials, or spikes. The computation performed by the neuron can be formulated as dimensional reduction, or feature detection, followed by a nonlinear decision function over the low-dimensional space. Generalizations of the reverse correlation technique with white noise input provide a numerical strategy for extracting the relevant low-dimensional features from experimental data, and information theory can be used to evaluate the quality of the low-dimensional approximation. We apply these methods to analyze the simplest biophysically realistic model neuron, the Hodgkin-Huxley (HH) model, using this system to illustrate the general methodological issues. We focus on the features in the stimulus that trigger a spike, explicitly eliminating the effects of interactions between spikes. One can approximate this triggering "feature space" as a two-dimensional linear subspace in the high-dimensional space of input histories, capturing in this way a substantial fraction of the mutual information between inputs and spike time. We find that an even better approximation, however, is to describe the relevant subspace as two dimensional but curved; in this way, we can capture 90% of the mutual information even at high time resolution. Our analysis provides a new understanding of the computational properties of the HH model. While it is common to approximate neural behavior as "integrate and fire," the HH model is not an integrator nor is it well described by a single threshold.

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Year:  2003        PMID: 14511510     DOI: 10.1162/08997660360675017

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  54 in total

1.  Parallel coding of first- and second-order stimulus attributes by midbrain electrosensory neurons.

Authors:  Patrick McGillivray; Katrin Vonderschen; Eric S Fortune; Maurice J Chacron
Journal:  J Neurosci       Date:  2012-04-18       Impact factor: 6.167

2.  A-current and type I/type II transition determine collective spiking from common input.

Authors:  Andrea K Barreiro; Evan L Thilo; Eric Shea-Brown
Journal:  J Neurophysiol       Date:  2012-06-06       Impact factor: 2.714

3.  A point process framework for modeling electrical stimulation of the auditory nerve.

Authors:  Joshua H Goldwyn; Jay T Rubinstein; Eric Shea-Brown
Journal:  J Neurophysiol       Date:  2012-06-06       Impact factor: 2.714

4.  Understanding spike-triggered covariance using Wiener theory for receptive field identification.

Authors:  Roman A Sandler; Vasilis Z Marmarelis
Journal:  J Vis       Date:  2015       Impact factor: 2.240

5.  Contributions of the input signal and prior activation history to the discharge behaviour of rat motoneurones.

Authors:  R K Powers; Y Dai; B M Bell; D B Percival; M D Binder
Journal:  J Physiol       Date:  2004-12-20       Impact factor: 5.182

6.  Predicting spike timing of neocortical pyramidal neurons by simple threshold models.

Authors:  Renaud Jolivet; Alexander Rauch; Hans-Rudolf Lüscher; Wulfram Gerstner
Journal:  J Comput Neurosci       Date:  2006-04-22       Impact factor: 1.621

7.  Effects of stimulus transformations on estimates of sensory neuron selectivity.

Authors:  Alexander G Dimitrov; Tomás Gedeon
Journal:  J Comput Neurosci       Date:  2006-04-22       Impact factor: 1.621

8.  On the importance of static nonlinearity in estimating spatiotemporal neural filters with natural stimuli.

Authors:  Tatyana O Sharpee; Kenneth D Miller; Michael P Stryker
Journal:  J Neurophysiol       Date:  2008-03-19       Impact factor: 2.714

9.  Two computational regimes of a single-compartment neuron separated by a planar boundary in conductance space.

Authors:  Brian Nils Lundstrom; Sungho Hong; Matthew H Higgs; Adrienne L Fairhall
Journal:  Neural Comput       Date:  2008-05       Impact factor: 2.026

10.  Relating neural dynamics to neural coding.

Authors:  G Bard Ermentrout; Roberto F Galán; Nathaniel N Urban
Journal:  Phys Rev Lett       Date:  2007-12-14       Impact factor: 9.161

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