Literature DB >> 18216238

Structure of the transmembrane regions of a bacterial cyclic nucleotide-regulated channel.

Gina M Clayton1, Steve Altieri, Lise Heginbotham, Vinzenz M Unger, João H Morais-Cabral.   

Abstract

The six-transmembrane helix (6 TM) tetrameric cation channels form the largest ion channel family, some members of which are voltage-gated and others are not. There are no reported channel structures to match the wealth of functional data on the non-voltage-gated members. We determined the structure of the transmembrane regions of the bacterial cyclic nucleotide-regulated channel MlotiK1, a non-voltage-gated 6 TM channel. The structure showed how the S1-S4 domain and its associated linker can serve as a clamp to constrain the gate of the pore and possibly function in concert with ligand-binding domains to regulate the opening of the pore. The structure also led us to hypothesize a new mechanism by which motions of the S6 inner helices can gate the ion conduction pathway at a position along the pore closer to the selectivity filter than the canonical helix bundle crossing.

Mesh:

Substances:

Year:  2008        PMID: 18216238      PMCID: PMC2234175          DOI: 10.1073/pnas.0711533105

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  Tracing the roots of ion channels.

Authors:  L Y Jan; Y N Jan
Journal:  Cell       Date:  1992-05-29       Impact factor: 41.582

2.  Structural basis of ligand activation in a cyclic nucleotide regulated potassium channel.

Authors:  Gina M Clayton; William R Silverman; Lise Heginbotham; João H Morais-Cabral
Journal:  Cell       Date:  2004-11-24       Impact factor: 41.582

3.  A helical molecule that exhibits two lengths in response to an applied potential.

Authors:  Kazuya Kitagawa; Tomoyuki Morita; Shunsaku Kimura
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-07       Impact factor: 15.336

4.  Voltage sensor of Kv1.2: structural basis of electromechanical coupling.

Authors:  Stephen B Long; Ernest B Campbell; Roderick Mackinnon
Journal:  Science       Date:  2005-07-07       Impact factor: 47.728

Review 5.  How does voltage open an ion channel?

Authors:  Francesco Tombola; Medha M Pathak; Ehud Y Isacoff
Journal:  Annu Rev Cell Dev Biol       Date:  2006       Impact factor: 13.827

6.  Solution structure of amphibian tachykinin Uperolein bound to DPC micelles.

Authors:  Anjali Dike; Sudha M Cowsik
Journal:  J Struct Biol       Date:  2006-08-01       Impact factor: 2.867

7.  Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel.

Authors:  Fabiana V Campos; Baron Chanda; Benoît Roux; Francisco Bezanilla
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-30       Impact factor: 11.205

8.  Coupling between voltage sensors and activation gate in voltage-gated K+ channels.

Authors:  Zhe Lu; Angela M Klem; Yajamana Ramu
Journal:  J Gen Physiol       Date:  2002-11       Impact factor: 4.086

9.  Solvent polarity controls the helical conformation of short peptides rich in Calpha-tetrasubstituted amino acids.

Authors:  Massimo Bellanda; Stefano Mammi; Silvano Geremia; Nicola Demitri; Lucio Randaccio; Quirinus B Broxterman; Bernard Kaptein; Paolo Pengo; Lucia Pasquato; Paolo Scrimin
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

10.  Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment.

Authors:  Stephen B Long; Xiao Tao; Ernest B Campbell; Roderick MacKinnon
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

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  101 in total

1.  Structural basis for gating charge movement in the voltage sensor of a sodium channel.

Authors:  Vladimir Yarov-Yarovoy; Paul G DeCaen; Ruth E Westenbroek; Chien-Yuan Pan; Todd Scheuer; David Baker; William A Catterall
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

Review 2.  Structures of membrane proteins.

Authors:  Kutti R Vinothkumar; Richard Henderson
Journal:  Q Rev Biophys       Date:  2010-02       Impact factor: 5.318

3.  Synchrotron radiation circular dichroism spectroscopy-defined structure of the C-terminal domain of NaChBac and its role in channel assembly.

Authors:  Andrew M Powl; Andrias O O'Reilly; Andrew J Miles; B A Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-27       Impact factor: 11.205

4.  Principles of conduction and hydrophobic gating in K+ channels.

Authors:  Morten Ø Jensen; David W Borhani; Kresten Lindorff-Larsen; Paul Maragakis; Vishwanath Jogini; Michael P Eastwood; Ron O Dror; David E Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-15       Impact factor: 11.205

Review 5.  Structural correlates of selectivity and inactivation in potassium channels.

Authors:  Jason G McCoy; Crina M Nimigean
Journal:  Biochim Biophys Acta       Date:  2011-09-16

6.  Analysis of inter-residue contacts reveals folding stabilizers in P-loops of potassium, sodium, and TRPV channels.

Authors:  V S Korkosh; B S Zhorov; D B Tikhonov
Journal:  Eur Biophys J       Date:  2015-12-08       Impact factor: 1.733

Review 7.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

8.  hERG gating microdomains defined by S6 mutagenesis and molecular modeling.

Authors:  Sarah L Wynia-Smith; Anne Lynn Gillian-Daniel; Kenneth A Satyshur; Gail A Robertson
Journal:  J Gen Physiol       Date:  2008-11       Impact factor: 4.086

9.  Symmetry-restrained molecular dynamics simulations improve homology models of potassium channels.

Authors:  Andriy Anishkin; Adina L Milac; H Robert Guy
Journal:  Proteins       Date:  2010-03

10.  Structural Dynamics of the Paddle Motif Loop in the Activated Conformation of KvAP Voltage Sensor.

Authors:  Anindita Das; Satyaki Chatterjee; H Raghuraman
Journal:  Biophys J       Date:  2019-08-22       Impact factor: 4.033

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