Literature DB >> 17154197

Solvent polarity controls the helical conformation of short peptides rich in Calpha-tetrasubstituted amino acids.

Massimo Bellanda1, Stefano Mammi, Silvano Geremia, Nicola Demitri, Lucio Randaccio, Quirinus B Broxterman, Bernard Kaptein, Paolo Pengo, Lucia Pasquato, Paolo Scrimin.   

Abstract

The two peptides, rich in C(alpha)-tetrasubstituted amino acids, Ac-[Aib-L-(alphaMe)Val-Aib](2)-L-His-NH(2) (1) and Ac-[Aib-L-(alphaMe)Val-Aib](2)-O-tBu (2 a) are prevalently helical. They present the unique property of changing their conformation from the alpha- to the 3(10)-helix as a function of the polarity of the solvent: alpha in more polar solvents, 3(10) in less polar ones. Conclusive evidence of this reversible change of conformation is reported on the basis of the circular dichroism (CD) spectra and a detailed two-dimensional NMR analysis in two solvents (trifluoroethanol and methanol) refined with molecular dynamics calculations. The X-ray diffractometric analysis of the crystals of both peptides reveals that they assume a prevalent 3(10)-helix conformation in the solid state. This conformation is practically superimposable on that obtained from the NMR analysis of 1 in methanol. The NMR results further validate the reported CD signature of the 3(10)-helix and the use of the CD technique for its assessment.

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Year:  2007        PMID: 17154197     DOI: 10.1002/chem.200600719

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  3 in total

1.  Structure of the transmembrane regions of a bacterial cyclic nucleotide-regulated channel.

Authors:  Gina M Clayton; Steve Altieri; Lise Heginbotham; Vinzenz M Unger; João H Morais-Cabral
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-23       Impact factor: 11.205

Review 2.  3(10) helices in channels and other membrane proteins.

Authors:  Ricardo Simão Vieira-Pires; João Henrique Morais-Cabral
Journal:  J Gen Physiol       Date:  2010-12       Impact factor: 4.086

3.  Sensitivity of 2D IR spectra to peptide helicity: a concerted experimental and simulation study of an octapeptide.

Authors:  Neelanjana Sengupta; Hiroaki Maekawa; Wei Zhuang; Claudio Toniolo; Shaul Mukamel; Douglas J Tobias; Nien-Hui Ge
Journal:  J Phys Chem B       Date:  2009-09-03       Impact factor: 2.991

  3 in total

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