Literature DB >> 18202396

Investigations of CHD1 function in transcription and development of Drosophila melanogaster.

Ivy E McDaniel1, Jennifer M Lee, Matthew S Berger, Cori K Hanagami, Jennifer A Armstrong.   

Abstract

In this report we describe chd1 mutant alleles and show that the CHD1 chromatin-remodeling factor is important for wing development and fertility. While CHD1 colocalizes with elongating RNA polymerase II (Pol II) on polytene chromosomes, elongating Pol II can persist on chromatin in the absence of CHD1. These results clarify the roles of chromatin remodelers in transcription and provide novel insights into CHD1 function.

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Year:  2008        PMID： 18202396      PMCID： PMC2206105          DOI： 10.1534/genetics.107.079038

Source DB:  PubMed          Journal:  Genetics        ISSN： 0016-6731            Impact factor:   4.562


  18 in total

1.  A role for chromatin remodeling in transcriptional termination by RNA polymerase II.

Authors:  Claudia Alén; Nicholas A Kent; Hannah S Jones; Justin O'Sullivan; Agustín Aranda; Nicholas J Proudfoot
Journal:  Mol Cell       Date:  2002-12       Impact factor: 17.970

2.  Genetic and cytological analysis of Drosophila chromatin-remodeling factors.

Authors:  Davide F Corona; Jennifer A Armstrong; John W Tamkun
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

3.  CHD1 is concentrated in interbands and puffed regions of Drosophila polytene chromosomes.

Authors:  D G Stokes; K D Tartof; R P Perry
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

4.  The Drosophila melanogaster RAD54 homolog, DmRAD54, is involved in the repair of radiation damage and recombination.

Authors:  R Kooistra; K Vreeken; J B Zonneveld; A de Jong; J C Eeken; C J Osgood; J M Buerstedde; P H Lohman; A Pastink
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

5.  Chromatin remodeling protein Chd1 interacts with transcription elongation factors and localizes to transcribed genes.

Authors:  Rajna Simic; Derek L Lindstrom; Hien G Tran; Kelli L Roinick; Patrick J Costa; Alexander D Johnson; Grant A Hartzog; Karen M Arndt
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

Review 6.  Looking at oogenesis.

Authors:  E Verheyen; L Cooley
Journal:  Methods Cell Biol       Date:  1994       Impact factor: 1.441

7.  Genetic analysis of brahma: the Drosophila homolog of the yeast chromatin remodeling factor SWI2/SNF2.

Authors:  L K Elfring; C Daniel; O Papoulas; R Deuring; M Sarte; S Moseley; S J Beek; W R Waldrip; G Daubresse; A DePace; J A Kennison; J W Tamkun
Journal:  Genetics       Date:  1998-01       Impact factor: 4.562

8.  The ISWI chromatin-remodeling protein is required for gene expression and the maintenance of higher order chromatin structure in vivo.

Authors:  R Deuring; L Fanti; J A Armstrong; M Sarte; O Papoulas; M Prestel; G Daubresse; M Verardo; S L Moseley; M Berloco; T Tsukiyama; C Wu; S Pimpinelli; J W Tamkun
Journal:  Mol Cell       Date:  2000-02       Impact factor: 17.970

9.  The Drosophila kismet gene is related to chromatin-remodeling factors and is required for both segmentation and segment identity.

Authors:  G Daubresse; R Deuring; L Moore; O Papoulas; I Zakrajsek; W R Waldrip; M P Scott; J A Kennison; J W Tamkun
Journal:  Development       Date:  1999-03       Impact factor: 6.868

10.  CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo.

Authors:  Alexander Y Konev; Martin Tribus; Sung Yeon Park; Valerie Podhraski; Chin Yan Lim; Alexander V Emelyanov; Elena Vershilova; Vincenzo Pirrotta; James T Kadonaga; Alexandra Lusser; Dmitry V Fyodorov
Journal:  Science       Date:  2007-08-24       Impact factor: 47.728
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  22 in total

Review 1.  Modeling bidirectional transcription using silkmoth chorion gene promoters.

Authors:  Rena Lecanidou; Argyris Papantonis
Journal:  Organogenesis       Date:  2010 Jan-Mar       Impact factor: 2.500

Review 2.  Structure and mechanisms of lysine methylation recognition by the chromodomain in gene transcription.

Authors:  Kyoko L Yap; Ming-Ming Zhou
Journal:  Biochemistry       Date:  2011-02-23       Impact factor: 3.162

3.  Chd1 is essential for the high transcriptional output and rapid growth of the mouse epiblast.

Authors:  Marcela Guzman-Ayala; Michael Sachs; Fong Ming Koh; Courtney Onodera; Aydan Bulut-Karslioglu; Chih-Jen Lin; Priscilla Wong; Rachel Nitta; Jun S Song; Miguel Ramalho-Santos
Journal:  Development       Date:  2014-12-05       Impact factor: 6.868

Review 4.  Architects of the genome: CHD dysfunction in cancer, developmental disorders and neurological syndromes.

Authors:  Wangzhi Li; Alea A Mills
Journal:  Epigenomics       Date:  2014       Impact factor: 4.778

5.  Molecular genetic analysis of Chd3 and polytene chromosome region 76B-D in Drosophila melanogaster.

Authors:  Monica T Cooper; Alexander W Conant; James A Kennison
Journal:  Genetics       Date:  2010-05-03       Impact factor: 4.562

6.  Loss of CHD1 causes DNA repair defects and enhances prostate cancer therapeutic responsiveness.

Authors:  Vijayalakshmi Kari; Wael Yassin Mansour; Sanjay Kumar Raul; Simon J Baumgart; Andreas Mund; Marian Grade; Hüseyin Sirma; Ronald Simon; Hans Will; Matthias Dobbelstein; Ekkehard Dikomey; Steven A Johnsen
Journal:  EMBO Rep       Date:  2016-09-05       Impact factor: 8.807

7.  Identification of novel CHD1-associated collaborative alterations of genomic structure and functional assessment of CHD1 in prostate cancer.

Authors:  W Liu; J Lindberg; G Sui; J Luo; L Egevad; T Li; C Xie; M Wan; S-T Kim; Z Wang; A R Turner; Z Zhang; J Feng; Y Yan; J Sun; G S Bova; C M Ewing; G Yan; M Gielzak; S D Cramer; R L Vessella; S L Zheng; H Grönberg; W B Isaacs; J Xu
Journal:  Oncogene       Date:  2011-12-05       Impact factor: 9.867

Review 8.  Chromatin remodelling during development.

Authors:  Lena Ho; Gerald R Crabtree
Journal:  Nature       Date:  2010-01-28       Impact factor: 49.962

9.  Histone H3K4 and K36 methylation, Chd1 and Rpd3S oppose the functions of Saccharomyces cerevisiae Spt4-Spt5 in transcription.

Authors:  Tiffani Kiyoko Quan; Grant Ashley Hartzog
Journal:  Genetics       Date:  2009-11-30       Impact factor: 4.562

10.  TDP-43 Promotes Neurodegeneration by Impairing Chromatin Remodeling.

Authors:  Amit Berson; Ashley Sartoris; Raffaella Nativio; Vivianna Van Deerlin; Jon B Toledo; Sílvia Porta; Shichong Liu; Chia-Yu Chung; Benjamin A Garcia; Virginia M-Y Lee; John Q Trojanowski; F Brad Johnson; Shelley L Berger; Nancy M Bonini
Journal:  Curr Biol       Date:  2017-11-16       Impact factor: 10.834
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