Literature DB >> 20592866

Modeling bidirectional transcription using silkmoth chorion gene promoters.

Rena Lecanidou1, Argyris Papantonis.   

Abstract

Bidirectional transcription is an interesting feature of eukaryotic genomes; yet not all aspects of its mechanism are understood. Silkmoth choriogenesis is a model system for studying transcriptional regulation at the initiation level. As chorion genes comprise a large group of divergently transcribed gene pairs, we are presented with the possibility of investigating the intricacies of bidirectional transcription. Their well characterized 5' regulatory regions and expression profiles lay the foundation for investigating protein:protein and protein:DNA interactions, and RNA polymerase function during oocyte development. In this article we summarize current knowledge on chorion gene regulation and propose an approach to modeling bidirectional transcription using chorion promoters.

Keywords:  Bombyx mori; RNA polymerase II; bidirectional promoters; chorion genes; transcriptional regulation

Mesh:

Substances:

Year:  2010        PMID: 20592866      PMCID: PMC2861744          DOI: 10.4161/org.6.1.10696

Source DB:  PubMed          Journal:  Organogenesis        ISSN: 1547-6278            Impact factor:   2.500


  39 in total

Review 1.  Pervasive transcription constitutes a new level of eukaryotic genome regulation.

Authors:  Julia Berretta; Antonin Morillon
Journal:  EMBO Rep       Date:  2009-08-14       Impact factor: 8.807

2.  Transcription factor binding and modified histones in human bidirectional promoters.

Authors:  Jane M Lin; Patrick J Collins; Nathan D Trinklein; Yutao Fu; Hualin Xi; Richard M Myers; Zhiping Weng
Journal:  Genome Res       Date:  2007-06       Impact factor: 9.043

3.  Gene regulation and evolution in the chorion locus of Bombyx mori. Structural and developmental characterization of four eggshell genes and their flanking DNA regions.

Authors:  N Spoerel; H T Nguyen; F C Kafatos
Journal:  J Mol Biol       Date:  1986-07-05       Impact factor: 5.469

4.  Structure, organization and evolution of developmentally regulated chorion genes in a silkmoth.

Authors:  C W Jones; F C Kafatos
Journal:  Cell       Date:  1980-12       Impact factor: 41.582

5.  In vitro analysis of Bombyx mori early chorion gene regulation: stage specific expression involves interactions with C/EBP-like and GATA factors.

Authors:  S Sourmeli; L Kravariti; R Lecanidou
Journal:  Insect Biochem Mol Biol       Date:  2003-05       Impact factor: 4.714

Review 6.  The genetics and genomics of the silkworm, Bombyx mori.

Authors:  Marian R Goldsmith; Toru Shimada; Hiroaki Abe
Journal:  Annu Rev Entomol       Date:  2005       Impact factor: 19.686

7.  Identification of conserved microRNAs in Bombyx mori (silkworm) and regulation of fibroin L chain production by microRNAs in heterologous system.

Authors:  Jun Cao; Chuanzhou Tong; Xiaojie Wu; Jianning Lv; Zhaolin Yang; Yongfeng Jin
Journal:  Insect Biochem Mol Biol       Date:  2008-10-14       Impact factor: 4.714

8.  Prostaglandin signaling and ovarian follicle development in the silkmoth, Bombyx mori.

Authors:  Ednildo Machado; Luc Swevers; Nadia Sdralia; Marcelo N Medeiros; Fernando G Mello; Kostas Iatrou
Journal:  Insect Biochem Mol Biol       Date:  2007-04-14       Impact factor: 4.714

9.  Bidirectional promoters generate pervasive transcription in yeast.

Authors:  Zhenyu Xu; Wu Wei; Julien Gagneur; Fabiana Perocchi; Sandra Clauder-Münster; Jurgi Camblong; Elisa Guffanti; Françoise Stutz; Wolfgang Huber; Lars M Steinmetz
Journal:  Nature       Date:  2009-01-25       Impact factor: 49.962

10.  Coordinately expressed chorion genes of Bombyx mori: is developmental specificity determined by secondary structure recognition?

Authors:  K Iatrou; S G Tsitilou
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

View more
  1 in total

1.  Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta.

Authors:  Michael R Kanost; Estela L Arrese; Xiaolong Cao; Yun-Ru Chen; Sanjay Chellapilla; Marian R Goldsmith; Ewald Grosse-Wilde; David G Heckel; Nicolae Herndon; Haobo Jiang; Alexie Papanicolaou; Jiaxin Qu; Jose L Soulages; Heiko Vogel; James Walters; Robert M Waterhouse; Seung-Joon Ahn; Francisca C Almeida; Chunju An; Peshtewani Aqrawi; Anne Bretschneider; William B Bryant; Sascha Bucks; Hsu Chao; Germain Chevignon; Jayne M Christen; David F Clarke; Neal T Dittmer; Laura C F Ferguson; Spyridoula Garavelou; Karl H J Gordon; Ramesh T Gunaratna; Yi Han; Frank Hauser; Yan He; Hanna Heidel-Fischer; Ariana Hirsh; Yingxia Hu; Hongbo Jiang; Divya Kalra; Christian Klinner; Christopher König; Christie Kovar; Ashley R Kroll; Suyog S Kuwar; Sandy L Lee; Rüdiger Lehman; Kai Li; Zhaofei Li; Hanquan Liang; Shanna Lovelace; Zhiqiang Lu; Jennifer H Mansfield; Kyle J McCulloch; Tittu Mathew; Brian Morton; Donna M Muzny; David Neunemann; Fiona Ongeri; Yannick Pauchet; Ling-Ling Pu; Ioannis Pyrousis; Xiang-Jun Rao; Amanda Redding; Charles Roesel; Alejandro Sanchez-Gracia; Sarah Schaack; Aditi Shukla; Guillaume Tetreau; Yang Wang; Guang-Hua Xiong; Walther Traut; Tom K Walsh; Kim C Worley; Di Wu; Wenbi Wu; Yuan-Qing Wu; Xiufeng Zhang; Zhen Zou; Hannah Zucker; Adriana D Briscoe; Thorsten Burmester; Rollie J Clem; René Feyereisen; Cornelis J P Grimmelikhuijzen; Stavros J Hamodrakas; Bill S Hansson; Elisabeth Huguet; Lars S Jermiin; Que Lan; Herman K Lehman; Marce Lorenzen; Hans Merzendorfer; Ioannis Michalopoulos; David B Morton; Subbaratnam Muthukrishnan; John G Oakeshott; Will Palmer; Yoonseong Park; A Lorena Passarelli; Julio Rozas; Lawrence M Schwartz; Wendy Smith; Agnes Southgate; Andreas Vilcinskas; Richard Vogt; Ping Wang; John Werren; Xiao-Qiang Yu; Jing-Jiang Zhou; Susan J Brown; Steven E Scherer; Stephen Richards; Gary W Blissard
Journal:  Insect Biochem Mol Biol       Date:  2016-08-12       Impact factor: 4.714

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.