Literature DB >> 18199049

Tethering of proteins to RNAs by bacteriophage proteins.

Cecile Keryer-Bibens1, Carine Barreau, H Beverley Osborne.   

Abstract

Many steps in the control of gene expression are dependent on RNA-binding proteins, most of which are bi-functional, in as much as they both bind to RNA and interact with other protein partners in a functional complex. A powerful approach to study the functional properties of these proteins in vivo, independently of their RNA-binding ability, is to attach or tether them to specifically engineered reporter mRNAs whose fate can be easily followed. Two tethering systems have been mainly used in eukaryotic cells, namely the MS2 coat protein system and the lambda N-B box system. In this review, we firstly describe several studies in which these tethering systems have been used and provide an overview of these applications. We next describe the major features of these two systems, and, finally, we highlight a number of points that should be considered when designing experiments using this approach.

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Year:  2008        PMID: 18199049     DOI: 10.1042/BC20070067

Source DB:  PubMed          Journal:  Biol Cell        ISSN: 0248-4900            Impact factor:   4.458


  37 in total

Review 1.  Current strategies for Site-Directed RNA Editing using ADARs.

Authors:  Maria Fernanda Montiel-Gonzalez; Juan Felipe Diaz Quiroz; Joshua J C Rosenthal
Journal:  Methods       Date:  2018-11-29       Impact factor: 3.608

2.  Exon, intron and splice site locations in the spliceosomal B complex.

Authors:  Elmar Wolf; Berthold Kastner; Jochen Deckert; Christian Merz; Holger Stark; Reinhard Lührmann
Journal:  EMBO J       Date:  2009-06-18       Impact factor: 11.598

3.  Quantitative profiling of in vivo-assembled RNA-protein complexes using a novel integrated proteomic approach.

Authors:  Becky Pinjou Tsai; Xiaorong Wang; Lan Huang; Marian L Waterman
Journal:  Mol Cell Proteomics       Date:  2011-02-01       Impact factor: 5.911

4.  Depletion of the Trypanosome Pumilio domain protein PUF2 or of some other essential proteins causes transcriptome changes related to coding region length.

Authors:  Bhaskar Anand Jha; Abeer Fadda; Clementine Merce; Elisha Mugo; Dorothea Droll; Christine Clayton
Journal:  Eukaryot Cell       Date:  2014-03-28

Review 5.  Single molecule fluorescence approaches shed light on intracellular RNAs.

Authors:  Sethuramasundaram Pitchiaya; Laurie A Heinicke; Thomas C Custer; Nils G Walter
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

6.  Adding energy minimization strategy to peptide-design algorithm enables better search for RNA-binding peptides: Redesigned λ N peptide binds boxB RNA.

Authors:  Xingqing Xiao; Michelle E Hung; Joshua N Leonard; Carol K Hall
Journal:  J Comput Chem       Date:  2016-08-04       Impact factor: 3.376

7.  Identifying the assembly intermediate in which Gag first associates with unspliced HIV-1 RNA suggests a novel model for HIV-1 RNA packaging.

Authors:  Brook C Barajas; Motoko Tanaka; Bridget A Robinson; Daryl J Phuong; Kasana Chutiraka; Jonathan C Reed; Jaisri R Lingappa
Journal:  PLoS Pathog       Date:  2018-04-17       Impact factor: 6.823

8.  Selective Targeting of Mobile mRNAs to Plasmodesmata for Cell-to-Cell Movement.

Authors:  Kai-Ren Luo; Nien-Chen Huang; Tien-Shin Yu
Journal:  Plant Physiol       Date:  2018-03-26       Impact factor: 8.340

Review 9.  Structured non-coding RNAs and the RNP Renaissance.

Authors:  J Robert Hogg; Kathleen Collins
Journal:  Curr Opin Chem Biol       Date:  2008-10-23       Impact factor: 8.822

10.  Multiple Myo4 motors enhance ASH1 mRNA transport in Saccharomyces cerevisiae.

Authors:  Sunglan Chung; Peter A Takizawa
Journal:  J Cell Biol       Date:  2010-05-10       Impact factor: 10.539

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