Literature DB >> 18189239

A genomic scan for age at onset of Alzheimer's disease in 437 families from the NIMH Genetic Initiative.

M Ryan Dickson1, Jian Li, Howard W Wiener, Rodney T Perry, Deborah Blacker, Susan S Bassett, Rodney C P Go.   

Abstract

We performed linkage analysis for age at onset (AAO) in the total Alzheimer's disease (AD) NIMH sample (N = 437 families). Families were subset as late-onset (320 families, AAO > or = 65) and early/mixed (117 families, at least 1 member with 50 < AAO < 65). Treating AAO as a censored trait, we obtained the gender and APOE adjusted residuals in a parametric survival model and analyzed the residuals as the quantitative trait (QT) in variance-component linkage analysis. For comparison, AAO-age at exam (AAE) was analyzed as the QT adjusting for affection status, gender, and APOE. Heritabilities for residual and AAO-AAE outcomes were 66.3% and 74.0%, respectively for the total sample, 56.0% and 57.0% in the late-onset sample, and 33.0% for both models in the early/mixed sample. The residual model yielded the largest peaks on chromosome 1 with LOD = 2.0 at 190 cM in the total set, LOD = 1.7 at 116 cM on chromosome 3 in the early/mixed subset, and LOD = 1.4 at 71 and 86 cM, respectively, on chromosome 6 in the late-onset subset. For the AAO-AAE outcome model the largest peaks were identified on chromosome 1 at 137 cM (LOD = 2.8) and chromosome 6 at 69 cM (LOD = 2.3) and 86 cM (LOD = 2.2) all in the late-onset subset. Additional peaks with LOD > or = 1 were identified on chromosomes 1, 2, 3, 6, 8, 9, 10, and 12 for the total sample and each subset. Results replicate previous findings, but identify additional suggestive peaks indicating the genetics of AAO in AD is complex with many chromosomal regions potentially containing modifying genes. 2008 Wiley-Liss, Inc.

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Year:  2008        PMID: 18189239      PMCID: PMC2661765          DOI: 10.1002/ajmg.b.30689

Source DB:  PubMed          Journal:  Am J Med Genet B Neuropsychiatr Genet        ISSN: 1552-4841            Impact factor:   3.568


  50 in total

1.  Further evidence linking late-onset Alzheimer disease with chromosome 12.

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Journal:  JAMA       Date:  1999-02-10       Impact factor: 56.272

2.  Chromosome 12 and late-onset Alzheimer's disease.

Authors:  S E Poduslo; X Yin
Journal:  Neurosci Lett       Date:  2001-09-14       Impact factor: 3.046

3.  Effects of covariates: a summary of Group 5 contributions.

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Review 4.  Regression models for linkage: issues of traits, covariates, heterogeneity, and interaction.

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6.  Risk factors for Alzheimer's disease: an overview for clinical practitioners.

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7.  Parametric and nonparametric linkage analysis: a unified multipoint approach.

Authors:  L Kruglyak; M J Daly; M P Reeve-Daly; E S Lander
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8.  Heritability for Alzheimer's disease: the study of dementia in Swedish twins.

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9.  Evidence for novel susceptibility genes for late-onset Alzheimer's disease from a genome-wide association study of putative functional variants.

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10.  Effects of age, sex, and ethnicity on the association between apolipoprotein E genotype and Alzheimer disease. A meta-analysis. APOE and Alzheimer Disease Meta Analysis Consortium.

Authors:  L A Farrer; L A Cupples; J L Haines; B Hyman; W A Kukull; R Mayeux; R H Myers; M A Pericak-Vance; N Risch; C M van Duijn
Journal:  JAMA       Date:  1997 Oct 22-29       Impact factor: 56.272

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Journal:  Neurobiol Aging       Date:  2010-06-30       Impact factor: 4.673

2.  Evidence for three loci modifying age-at-onset of Alzheimer's disease in early-onset PSEN2 families.

Authors:  Elizabeth E Marchani; Thomas D Bird; Ellen J Steinbart; Elisabeth Rosenthal; Chang-En Yu; Gerard D Schellenberg; Ellen M Wijsman
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2010-07       Impact factor: 3.568

3.  Genome scan of age-at-onset in the NIMH Alzheimer disease sample uncovers multiple loci, along with evidence of both genetic and sample heterogeneity.

Authors:  Yoonha Choi; Elizabeth E Marchani; Thomas D Bird; Ellen J Steinbart; Deborah Blacker; Ellen M Wijsman
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2011-08-02       Impact factor: 3.568

4.  Identification of genetic heterogeneity of Alzheimer's disease across age.

Authors:  Min-Tzu Lo; Karolina Kauppi; Chun-Chieh Fan; Nilotpal Sanyal; Emilie T Reas; V S Sundar; Wen-Chung Lee; Rahul S Desikan; Linda K McEvoy; Chi-Hua Chen
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5.  Family-based genome scan for age at onset of late-onset Alzheimer's disease in whole exome sequencing data.

Authors:  M Saad; Z Brkanac; E M Wijsman
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Review 6.  Apolipoprotein E, gender, and Alzheimer's disease: an overlooked, but potent and promising interaction.

Authors:  Leo Ungar; Andre Altmann; Michael D Greicius
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7.  Genome scan in familial late-onset Alzheimer's disease: a locus on chromosome 6 contributes to age-at-onset.

Authors:  Wei Zhao; Elizabeth E Marchani; Charles Y K Cheung; Ellen J Steinbart; Gerard D Schellenberg; Thomas D Bird; Ellen M Wijsman
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2013-01-25       Impact factor: 3.568

8.  Alzheimer's disease risk genes and the age-at-onset phenotype.

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9.  Polygenic inheritance of paclitaxel-induced sensory peripheral neuropathy driven by axon outgrowth gene sets in CALGB 40101 (Alliance).

Authors:  A Chhibber; J Mefford; E A Stahl; S A Pendergrass; R M Baldwin; K Owzar; M Li; E P Winer; C A Hudis; H Zembutsu; M Kubo; Y Nakamura; H L McLeod; M J Ratain; L N Shulman; M D Ritchie; R M Plenge; J S Witte; D L Kroetz
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10.  Effects of multiple genetic loci on age at onset in late-onset Alzheimer disease: a genome-wide association study.

Authors:  Adam C Naj; Gyungah Jun; Christiane Reitz; Brian W Kunkle; William Perry; Yo Son Park; Gary W Beecham; Ruchita A Rajbhandary; Kara L Hamilton-Nelson; Li-San Wang; John S K Kauwe; Matthew J Huentelman; Amanda J Myers; Thomas D Bird; Bradley F Boeve; Clinton T Baldwin; Gail P Jarvik; Paul K Crane; Ekaterina Rogaeva; M Michael Barmada; F Yesim Demirci; Carlos Cruchaga; Patricia L Kramer; Nilufer Ertekin-Taner; John Hardy; Neill R Graff-Radford; Robert C Green; Eric B Larson; Peter H St George-Hyslop; Joseph D Buxbaum; Denis A Evans; Julie A Schneider; Kathryn L Lunetta; M Ilyas Kamboh; Andrew J Saykin; Eric M Reiman; Philip L De Jager; David A Bennett; John C Morris; Thomas J Montine; Alison M Goate; Deborah Blacker; Debby W Tsuang; Hakon Hakonarson; Walter A Kukull; Tatiana M Foroud; Eden R Martin; Jonathan L Haines; Richard P Mayeux; Lindsay A Farrer; Gerard D Schellenberg; Margaret A Pericak-Vance; Marilyn S Albert; Roger L Albin; Liana G Apostolova; Steven E Arnold; Robert Barber; Lisa L Barnes; Thomas G Beach; James T Becker; Duane Beekly; Eileen H Bigio; James D Bowen; Adam Boxer; James R Burke; Nigel J Cairns; Laura B Cantwell; Chuanhai Cao; Chris S Carlson; Regina M Carney; Minerva M Carrasquillo; Steven L Carroll; Helena C Chui; David G Clark; Jason Corneveaux; David H Cribbs; Elizabeth A Crocco; Charles DeCarli; Steven T DeKosky; Malcolm Dick; Dennis W Dickson; Ranjan Duara; Kelley M Faber; Kenneth B Fallon; Martin R Farlow; Steven Ferris; Matthew P Frosch; Douglas R Galasko; Mary Ganguli; Marla Gearing; Daniel H Geschwind; Bernardino Ghetti; John R Gilbert; Jonathan D Glass; John H Growdon; Ronald L Hamilton; Lindy E Harrell; Elizabeth Head; Lawrence S Honig; Christine M Hulette; Bradley T Hyman; Gregory A Jicha; Lee-Way Jin; Anna Karydas; Jeffrey A Kaye; Ronald Kim; Edward H Koo; Neil W Kowall; Joel H Kramer; Frank M LaFerla; James J Lah; James B Leverenz; Allan I Levey; Ge Li; Andrew P Lieberman; Chiao-Feng Lin; Oscar L Lopez; Constantine G Lyketsos; Wendy J Mack; Frank Martiniuk; Deborah C Mash; Eliezer Masliah; Wayne C McCormick; Susan M McCurry; Andrew N McDavid; Ann C McKee; Marsel Mesulam; Bruce L Miller; Carol A Miller; Joshua W Miller; Jill R Murrell; John M Olichney; Vernon S Pankratz; Joseph E Parisi; Henry L Paulson; Elaine Peskind; Ronald C Petersen; Aimee Pierce; Wayne W Poon; Huntington Potter; Joseph F Quinn; Ashok Raj; Murray Raskind; Barry Reisberg; John M Ringman; Erik D Roberson; Howard J Rosen; Roger N Rosenberg; Mary Sano; Lon S Schneider; William W Seeley; Amanda G Smith; Joshua A Sonnen; Salvatore Spina; Robert A Stern; Rudolph E Tanzi; Tricia A Thornton-Wells; John Q Trojanowski; Juan C Troncoso; Otto Valladares; Vivianna M Van Deerlin; Linda J Van Eldik; Badri N Vardarajan; Harry V Vinters; Jean Paul Vonsattel; Sandra Weintraub; Kathleen A Welsh-Bohmer; Jennifer Williamson; Sarah Wishnek; Randall L Woltjer; Clinton B Wright; Steven G Younkin; Chang-En Yu; Lei Yu
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