Literature DB >> 18178771

Arabidopsis UEV1D promotes Lysine-63-linked polyubiquitination and is involved in DNA damage response.

Rui Wen1, J Antonio Torres-Acosta, Landon Pastushok, Xiaoqin Lai, Lindsay Pelzer, Hong Wang, Wei Xiao.   

Abstract

DNA damage tolerance (DDT) in budding yeast requires Lys-63-linked polyubiquitination of the proliferating cell nuclear antigen. The ubiquitin-conjugating enzyme Ubc13 and the Ubc enzyme variant (Uev) methyl methanesulfonate2 (Mms2) are required for this process. Mms2 homologs have been found in all eukaryotic genomes examined; however, their roles in multicellular eukaryotes have not been elucidated. We report the isolation and characterization of four UEV1 genes from Arabidopsis thaliana. All four Uev1 proteins can form a stable complex with At Ubc13 or with Ubc13 from yeast or human and can promote Ubc13-mediated Lys-63 polyubiquitination. All four Uev1 proteins can replace yeast MMS2 DDT functions in vivo. Although these genes are ubiquitously expressed in most tissues, UEV1D appears to express at a much higher level in germinating seeds and in pollen. We obtained and characterized two uev1d null mutant T-DNA insertion lines. Compared with wild-type plants, seeds from uev1d null plants germinated poorly when treated with a DNA-damaging agent. Those that germinated grew slower, and the majority ceased growth within 2 weeks. Pollen from uev1d plants also displayed a moderate but significant decrease in germination in the presence of DNA damage. This report links Ubc13-Uev with functions in DNA damage response in Arabidopsis.

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Year:  2008        PMID: 18178771      PMCID: PMC2254933          DOI: 10.1105/tpc.107.051862

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  73 in total

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Authors:  C M Pickart
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

Review 2.  DNA postreplication repair modulated by ubiquitination and sumoylation.

Authors:  Landon Pastushok; Wei Xiao
Journal:  Adv Protein Chem       Date:  2004

3.  A gene expression map of Arabidopsis thaliana development.

Authors:  Markus Schmid; Timothy S Davison; Stefan R Henz; Utz J Pape; Monika Demar; Martin Vingron; Bernhard Schölkopf; Detlef Weigel; Jan U Lohmann
Journal:  Nat Genet       Date:  2005-04-03       Impact factor: 38.330

4.  Alpha-synuclein and parkin contribute to the assembly of ubiquitin lysine 63-linked multiubiquitin chains.

Authors:  Ellen W Doss-Pepe; Li Chen; Kiran Madura
Journal:  J Biol Chem       Date:  2005-02-16       Impact factor: 5.157

5.  Ubiquitin binding site of the ubiquitin E2 variant (UEV) protein Mms2 is required for DNA damage tolerance in the yeast RAD6 pathway.

Authors:  Colleen Tsui; Arani Raguraj; Cecile M Pickart
Journal:  J Biol Chem       Date:  2005-03-16       Impact factor: 5.157

6.  Roles of Arabidopsis AtREV1 and AtREV7 in translesion synthesis.

Authors:  Shinya Takahashi; Ayako Sakamoto; Shusei Sato; Tomohiko Kato; Satoshi Tabata; Atsushi Tanaka
Journal:  Plant Physiol       Date:  2005-05-20       Impact factor: 8.340

7.  Transcriptional profile of the Arabidopsis root quiescent center.

Authors:  Tal Nawy; Ji-Young Lee; Juliette Colinas; Jean Y Wang; Sumena C Thongrod; Jocelyn E Malamy; Kenneth Birnbaum; Philip N Benfey
Journal:  Plant Cell       Date:  2005-06-03       Impact factor: 11.277

8.  SUMO-modified PCNA recruits Srs2 to prevent recombination during S phase.

Authors:  Boris Pfander; George-Lucian Moldovan; Meik Sacher; Carsten Hoege; Stefan Jentsch
Journal:  Nature       Date:  2005-06-01       Impact factor: 49.962

9.  Crosstalk between SUMO and ubiquitin on PCNA is mediated by recruitment of the helicase Srs2p.

Authors:  Efterpi Papouli; Shuhua Chen; Adelina A Davies; Diana Huttner; Lumir Krejci; Patrick Sung; Helle D Ulrich
Journal:  Mol Cell       Date:  2005-07-01       Impact factor: 17.970

10.  A single Mms2 "key" residue insertion into a Ubc13 pocket determines the interface specificity of a human Lys63 ubiquitin conjugation complex.

Authors:  Landon Pastushok; Trevor F Moraes; Michael J Ellison; Wei Xiao
Journal:  J Biol Chem       Date:  2005-03-04       Impact factor: 5.157

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  35 in total

1.  Arabidopsis membrane-anchored ubiquitin-fold (MUB) proteins localize a specific subset of ubiquitin-conjugating (E2) enzymes to the plasma membrane.

Authors:  Rebecca T Dowil; Xiaolong Lu; Scott A Saracco; Richard D Vierstra; Brian P Downes
Journal:  J Biol Chem       Date:  2011-02-23       Impact factor: 5.157

2.  The ubiquitination machinery of the ubiquitin system.

Authors:  Judy Callis
Journal:  Arabidopsis Book       Date:  2014-10-06

3.  Protein abundance changes and ubiquitylation targets identified after inhibition of the proteasome with syringolin A.

Authors:  Julia Svozil; Matthias Hirsch-Hoffmann; Robert Dudler; Wilhelm Gruissem; Katja Baerenfaller
Journal:  Mol Cell Proteomics       Date:  2014-04-13       Impact factor: 5.911

4.  Deletion of TLS polymerases promotes homologous recombination in Arabidopsis.

Authors:  A N Sakamoto; H Kaya; M Endo
Journal:  Plant Signal Behav       Date:  2018-06-26

5.  The tomato Fni3 lysine-63-specific ubiquitin-conjugating enzyme and suv ubiquitin E2 variant positively regulate plant immunity.

Authors:  Ravi V Mural; Yao Liu; Tracy R Rosebrock; Jennifer J Brady; Sadia Hamera; Richard A Connor; Gregory B Martin; Lirong Zeng
Journal:  Plant Cell       Date:  2013-09-27       Impact factor: 11.277

6.  Evidence for network evolution in an Arabidopsis interactome map.

Authors: 
Journal:  Science       Date:  2011-07-29       Impact factor: 47.728

7.  The tomato ubiquitin-conjugating enzyme variant Suv, but not SlUev1C and SlUev1D regulates Fen-mediated programmed cell death in Nicotiana benthamiana.

Authors:  Sadia Hamera; Ravi M Mural; Yao Liu; Lirong Zeng
Journal:  Plant Signal Behav       Date:  2014

8.  Arabidopsis PUB22 and PUB23 are homologous U-Box E3 ubiquitin ligases that play combinatory roles in response to drought stress.

Authors:  Seok Keun Cho; Moon Young Ryu; Charlotte Song; June M Kwak; Woo Taek Kim
Journal:  Plant Cell       Date:  2008-07-29       Impact factor: 11.277

9.  Unraveling K63 Polyubiquitination Networks by Sensor-Based Proteomics.

Authors:  Alexander Johnson; Grégory Vert
Journal:  Plant Physiol       Date:  2016-05-09       Impact factor: 8.340

10.  Molecular identification and interaction assay of the gene (OsUbc13) encoding a ubiquitin-conjugating enzyme in rice.

Authors:  Ya Wang; Meng-yun Xu; Jian-ping Liu; Mu-gui Wang; Hai-qing Yin; Ju-min Tu
Journal:  J Zhejiang Univ Sci B       Date:  2014-07       Impact factor: 3.066

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