Literature DB >> 18162598

Silicon uptake in diatoms revisited: a model for saturable and nonsaturable uptake kinetics and the role of silicon transporters.

Kimberlee Thamatrakoln1, Mark Hildebrand.   

Abstract

The silicic acid uptake kinetics of diatoms were studied to provide a mechanistic explanation for previous work demonstrating both nonsaturable and Michaelis-Menten-type saturable uptake. Using (68)Ge(OH)(4) as a radiotracer for Si(OH)(4), we showed a time-dependent transition from nonsaturable to saturable uptake kinetics in multiple diatom species. In cells grown under silicon (Si)-replete conditions, Si(OH)(4) uptake was initially nonsaturable but became saturable over time. Cells prestarved for Si for 24 h exhibited immediate saturable kinetics. Data suggest nonsaturability was due to surge uptake when intracellular Si pool capacity was high, and saturability occurred when equilibrium was achieved between pool capacity and cell wall silica incorporation. In Thalassiosira pseudonana at low Si(OH)(4) concentrations, uptake followed sigmoidal kinetics, indicating regulation by an allosteric mechanism. Competition of Si(OH)(4) uptake with Ge(OH)(4) suggested uptake at low Si(OH)(4) concentrations was mediated by Si transporters. At high Si(OH)(4), competition experiments and nonsaturability indicated uptake was not carrier mediated and occurred by diffusion. Zinc did not appear to be directly involved in Si(OH)(4) uptake, in contrast to a previous suggestion. A model for Si(OH)(4) uptake in diatoms is presented that proposes two control mechanisms: active transport by Si transporters at low Si(OH)(4) and diffusional transport controlled by the capacity of intracellular pools in relation to cell wall silica incorporation at high Si(OH)(4). The model integrates kinetic and equilibrium components of diatom Si(OH)(4) uptake and consistently explains results in this and previous investigations.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18162598      PMCID: PMC2259041          DOI: 10.1104/pp.107.107094

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  21 in total

1.  Extreme zinc-binding thermodynamics of the metal sensor/regulator protein, ZntR.

Authors:  Y Hitomi; C E Outten; T V O'Halloran
Journal:  J Am Chem Soc       Date:  2001-09-05       Impact factor: 15.419

Review 2.  Components and control of silicification in diatoms.

Authors:  Mark Hildebrand; Richard Wetherbee
Journal:  Prog Mol Subcell Biol       Date:  2003

3.  Studies of marine planktonic diatoms. I. Cyclotella nana Hustedt, and Detonula confervacea (cleve) Gran.

Authors:  R R GUILLARD; J H RYTHER
Journal:  Can J Microbiol       Date:  1962-04       Impact factor: 2.419

Review 4.  The ATP switch model for ABC transporters.

Authors:  Christopher F Higgins; Kenneth J Linton
Journal:  Nat Struct Mol Biol       Date:  2004-10       Impact factor: 15.369

5.  Detection of the gene responsible for silicic acid transport in chrysophycean algae.

Authors:  Ye V Likhoshway; Yu A Masyukova; T A Sherbakova; D P Petrova; M A Grachev
Journal:  Dokl Biol Sci       Date:  2006 May-Jun

6.  The silica balance in the world ocean: a reestimate.

Authors:  P Tréguer; D M Nelson; A J Van Bennekom; D J Demaster; A Leynaert; B Quéguiner
Journal:  Science       Date:  1995-04-21       Impact factor: 47.728

7.  Salinity-dependent diatom biosilicification implies an important role of external ionic strength.

Authors:  Engel G Vrieling; Qianyao Sun; Mingwen Tian; Patricia J Kooyman; Winfried W C Gieskes; Rutger A van Santen; Nico A J M Sommerdijk
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-11       Impact factor: 11.205

8.  Characterization of a silicon transporter gene family in Cylindrotheca fusiformis: sequences, expression analysis, and identification of homologs in other diatoms.

Authors:  M Hildebrand; K Dahlin; B E Volcani
Journal:  Mol Gen Genet       Date:  1998-12

9.  Evidence for two interacting ligand binding sites in human multidrug resistance protein 2 (ATP binding cassette C2).

Authors:  Noam Zelcer; Maarten T Huisman; Glen Reid; Peter Wielinga; Pauline Breedveld; Annemieke Kuil; Puck Knipscheer; Jan H M Schellens; Alfred H Schinkel; Piet Borst
Journal:  J Biol Chem       Date:  2003-04-17       Impact factor: 5.157

10.  An efflux transporter of silicon in rice.

Authors:  Jian Feng Ma; Naoki Yamaji; Namiki Mitani; Kazunori Tamai; Saeko Konishi; Toru Fujiwara; Maki Katsuhara; Masahiro Yano
Journal:  Nature       Date:  2007-07-12       Impact factor: 49.962

View more
  30 in total

1.  Combined toxicity of arsenite and dimethylarsenic acid on the freshwater diatom Nitzschia palea.

Authors:  Tengda Ding; Jianying Zhang; Wanmin Ni; Juying Li
Journal:  Ecotoxicology       Date:  2017-01-02       Impact factor: 2.823

2.  Plasmodium falciparum: a paradigm for alternative folate biosynthesis in diverse microorganisms?

Authors:  John E Hyde; Sabine Dittrich; Ping Wang; Paul F G Sims; Valérie de Crécy-Lagard; Andrew D Hanson
Journal:  Trends Parasitol       Date:  2008-09-19

3.  Evidence for a regulatory role of diatom silicon transporters in cellular silicon responses.

Authors:  Roshan P Shrestha; Mark Hildebrand
Journal:  Eukaryot Cell       Date:  2014-11-07

4.  A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates.

Authors:  Alan O Marron; Mark J Alston; Darren Heavens; Michael Akam; Mario Caccamo; Peter W H Holland; Giselle Walker
Journal:  Proc Biol Sci       Date:  2013-02-13       Impact factor: 5.349

Review 5.  Diatom Molecular Research Comes of Age: Model Species for Studying Phytoplankton Biology and Diversity.

Authors:  Angela Falciatore; Marianne Jaubert; Jean-Pierre Bouly; Benjamin Bailleul; Thomas Mock
Journal:  Plant Cell       Date:  2019-12-18       Impact factor: 11.277

6.  Silicon does not mitigate cell death in cultured tobacco BY-2 cells subjected to salinity without ethylene emission.

Authors:  Xiaolei Liang; Huahua Wang; Yanfeng Hu; Lina Mao; Lili Sun; Tian Dong; Wenbin Nan; Yurong Bi
Journal:  Plant Cell Rep       Date:  2014-12-05       Impact factor: 4.570

7.  Putative silicon transport vesicles in the cytoplasm of the diatom Synedra acus during surge uptake of silicon.

Authors:  Vadim V Annenkov; Tatjana N Basharina; Elena N Danilovtseva; Mikhail A Grachev
Journal:  Protoplasma       Date:  2013-03-24       Impact factor: 3.356

8.  The C-Terminal Zwitterionic Sequence of CotB1 Is Essential for Biosilicification of the Bacillus cereus Spore Coat.

Authors:  Kei Motomura; Takeshi Ikeda; Satoshi Matsuyama; Mohamed A A Abdelhamid; Tatsuya Tanaka; Takenori Ishida; Ryuichi Hirota; Akio Kuroda
Journal:  J Bacteriol       Date:  2015-10-26       Impact factor: 3.490

9.  A biomimetic peptide has no effect on the isotopic fractionation during in vitro silica precipitation.

Authors:  Paul Curnow; Katharine R Hendry; Lucie Cassarino
Journal:  Sci Rep       Date:  2021-05-06       Impact factor: 4.379

10.  Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters.

Authors:  Guillaume Sapriel; Michelle Quinet; Marc Heijde; Laurent Jourdren; Véronique Tanty; Guangzuo Luo; Stéphane Le Crom; Pascal Jean Lopez
Journal:  PLoS One       Date:  2009-10-14       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.