Literature DB >> 18155046

Single strand binding proteins increase the processivity of DNA unwinding by the hepatitis C virus helicase.

Vaishnavi Rajagopal1, Smita S Patel.   

Abstract

The nonstructural NS3 protein of the hepatitis C virus is a multifunctional enzyme with an N-terminal serine protease activity and a C-terminal helicase activity. The helicase is capable of unwinding both DNA and RNA duplexes; however, the overall processivity of the helicase is fairly low. We show here that single-strand binding (SSB) proteins enhance the unwinding processivity of both the NS3 helicase domain (NS3h) and the full-length protease-helicase NS3-4A. The detailed study of the effect of SSB on the DNA unwinding activity of NS3h indicates that the SSB stabilizes the helicase at the unwinding junction and prevents its dissociation. These results suggest a potential role for either cellular or virus-encoded SSB protein in improving the processivity of the NS3 in vivo.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18155046      PMCID: PMC2249756          DOI: 10.1016/j.jmb.2007.10.070

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  55 in total

1.  Functional and physical interaction between WRN helicase and human replication protein A.

Authors:  R M Brosh; D K Orren; J O Nehlin; P H Ravn; M K Kenny; A Machwe; V A Bohr
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

2.  Simultaneous interactions of bacteriophage T4 DNA replication proteins gp59 and gp32 with single-stranded (ss) DNA. Co-modulation of ssDNA binding activities in a DNA helicase assembly intermediate.

Authors:  S D Lefebvre; M L Wong; S W Morrical
Journal:  J Biol Chem       Date:  1999-08-06       Impact factor: 5.157

3.  Increasing the length of the single-stranded overhang enhances unwinding of duplex DNA by bacteriophage T4 Dda helicase.

Authors:  Alicia K Byrd; Kevin D Raney
Journal:  Biochemistry       Date:  2005-10-04       Impact factor: 3.162

4.  DNA synthesis provides the driving force to accelerate DNA unwinding by a helicase.

Authors:  Natalie M Stano; Yong-Joo Jeong; Ilker Donmez; Padmaja Tummalapalli; Mikhail K Levin; Smita S Patel
Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

Review 5.  Hepatitis C virus NS3/4A protease.

Authors:  A D Kwong; J L Kim; G Rao; D Lipovsek; S A Raybuck
Journal:  Antiviral Res       Date:  1998-12       Impact factor: 5.970

6.  A novel recombinant single-chain hepatitis C virus NS3-NS4A protein with improved helicase activity.

Authors:  A Y Howe; R Chase; S S Taremi; C Risano; B Beyer; B Malcolm; J Y Lau
Journal:  Protein Sci       Date:  1999-06       Impact factor: 6.725

7.  PriB stimulates PriA helicase via an interaction with single-stranded DNA.

Authors:  Chris J Cadman; Matthew Lopper; Peter B Moon; James L Keck; Peter McGlynn
Journal:  J Biol Chem       Date:  2005-09-27       Impact factor: 5.157

8.  Hepatitis C virus nonstructural protein 5A (NS5A) is an RNA-binding protein.

Authors:  Luyun Huang; Jungwook Hwang; Suresh D Sharma; Michele R S Hargittai; Yingfeng Chen; Jamie J Arnold; Kevin D Raney; Craig E Cameron
Journal:  J Biol Chem       Date:  2005-08-25       Impact factor: 5.157

9.  Role of La autoantigen and polypyrimidine tract-binding protein in HCV replication.

Authors:  Angela M Domitrovich; Kevin W Diebel; Naushad Ali; Shameema Sarker; Aleem Siddiqui
Journal:  Virology       Date:  2005-04-25       Impact factor: 3.616

10.  PriA helicase and SSB interact physically and functionally.

Authors:  Chris J Cadman; Peter McGlynn
Journal:  Nucleic Acids Res       Date:  2004-12-02       Impact factor: 16.971

View more
  20 in total

Review 1.  Hepatitis C virus non-structural protein 3 (HCV NS3): a multifunctional antiviral target.

Authors:  Kevin D Raney; Suresh D Sharma; Ibrahim M Moustafa; Craig E Cameron
Journal:  J Biol Chem       Date:  2010-05-10       Impact factor: 5.157

2.  Hepatitis C virus NS3 helicase forms oligomeric structures that exhibit optimal DNA unwinding activity in vitro.

Authors:  Bartek Sikora; Yingfeng Chen; Cheryl F Lichti; Melody K Harrison; Thomas A Jennings; Yong Tang; Alan J Tackett; John B Jordan; Joshua Sakon; Craig E Cameron; Kevin D Raney
Journal:  J Biol Chem       Date:  2008-02-18       Impact factor: 5.157

3.  Processivity, Velocity, and Universal Characteristics of Nucleic Acid Unwinding by Helicases.

Authors:  Shaon Chakrabarti; Christopher Jarzynski; D Thirumalai
Journal:  Biophys J       Date:  2019-07-20       Impact factor: 4.033

4.  Structure and Mechanisms of SF1 DNA Helicases.

Authors:  Kevin D Raney; Alicia K Byrd; Suja Aarattuthodiyil
Journal:  Adv Exp Med Biol       Date:  2013       Impact factor: 2.622

Review 5.  Inching over hurdles: how DNA helicases move on crowded lattices.

Authors:  Maria Spies; Taekjip Ha
Journal:  Cell Cycle       Date:  2010-05-06       Impact factor: 4.534

Review 6.  Two steps forward, one step back: determining XPD helicase mechanism by single-molecule fluorescence and high-resolution optical tweezers.

Authors:  Maria Spies
Journal:  DNA Repair (Amst)       Date:  2014-02-21

7.  Dynamics of DNA nicking and unwinding by the RepC-PcrA complex.

Authors:  Carolina Carrasco; Cesar L Pastrana; Clara Aicart-Ramos; Sanford H Leuba; Saleem A Khan; Fernando Moreno-Herrero
Journal:  Nucleic Acids Res       Date:  2020-02-28       Impact factor: 16.971

8.  NS3 helicase from the hepatitis C virus can function as a monomer or oligomer depending on enzyme and substrate concentrations.

Authors:  Thomas A Jennings; Samuel G Mackintosh; Melody K Harrison; Deniz Sikora; Bartek Sikora; Bhuvanesh Dave; Alan J Tackett; Craig E Cameron; Kevin D Raney
Journal:  J Biol Chem       Date:  2008-12-16       Impact factor: 5.157

9.  Unique and important consequences of RECQ1 deficiency in mammalian cells.

Authors:  Sudha Sharma; Robert M Brosh
Journal:  Cell Cycle       Date:  2008-01-30       Impact factor: 4.534

10.  Phosphate release contributes to the rate-limiting step for unwinding by an RNA helicase.

Authors:  Qixin Wang; Jamie J Arnold; Akira Uchida; Kevin D Raney; Craig E Cameron
Journal:  Nucleic Acids Res       Date:  2009-12-06       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.