Literature DB >> 18097667

Molecular cloning of three pyranose dehydrogenase-encoding genes from Agaricus meleagris and analysis of their expression by real-time RT-PCR.

Roman Kittl1, Christoph Sygmund, Petr Halada, Jindrich Volc, Christina Divne, Dietmar Haltrich, Clemens K Peterbauer.   

Abstract

Sugar oxidoreductases such as cellobiose dehydrogenase or pyranose oxidase are widespread enzymes among fungi, whose biological function is largely speculative. We investigated a similar gene family in the mushroom Agaricus meleagris and its expression under various conditions. Three genes (named pdh1, pdh2 and pdh3) putatively encoding pyranose dehydrogenases were isolated. All three genes displayed a conserved structure and organization, and the respective cDNAs contained ORFs translating into polypeptides of 602 or 600 amino acids. The N-terminal sections of all three genes encode putative signal peptides consistent with the enzymes extracellular secretion. We cultivated the fungus on different carbon sources and analyzed the mRNA levels of all three genes over a period of several weeks using real-time RT-PCR. The glyceraldehyde-3-phosphate dehydrogenase gene from A. meleagris was also isolated and served as reference gene. pdh2 and pdh3 are essentially transcribed constitutively, whereas pdh1 expression is upregulated upon exhaustion of the carbon source; pdh1 appears to be additionally regulated under conditions of oxygen limitation. These data are consistent with an assumed role in lignocellulose degradation.

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Year:  2007        PMID: 18097667     DOI: 10.1007/s00294-007-0171-9

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  25 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Pyranose Oxidase, a Major Source of H(2)O(2) during Wood Degradation by Phanerochaete chrysosporium, Trametes versicolor, and Oudemansiella mucida.

Authors:  G Daniel; J Volc; E Kubatova
Journal:  Appl Environ Microbiol       Date:  1994-07       Impact factor: 4.792

3.  Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences.

Authors:  T M Rose; E R Schultz; J G Henikoff; S Pietrokovski; C M McCallum; S Henikoff
Journal:  Nucleic Acids Res       Date:  1998-04-01       Impact factor: 16.971

Review 4.  Sugar oxidoreductases and veratryl alcohol oxidase as related to lignin degradation.

Authors:  P Ander; L Marzullo
Journal:  J Biotechnol       Date:  1997-03-14       Impact factor: 3.307

5.  The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies.

Authors:  Sreedhar Kilaru; Patrik J Hoegger; Ursula Kües
Journal:  Curr Genet       Date:  2006-04-28       Impact factor: 3.886

6.  Screening of basidiomycete fungi for the quinone-dependent sugar C-2/C-3 oxidoreductase, pyranose dehydrogenase, and properties of the enzyme from Macrolepiota rhacodes.

Authors:  J Volc; E Kubátová; G Daniel; P Sedmera; D Haltrich
Journal:  Arch Microbiol       Date:  2001-09       Impact factor: 2.552

7.  Sequence analysis of the glyceraldehyde-3-phosphate dehydrogenase genes from the basidiomycetes Schizophyllum commune, Phanerochaete chrysosporium and Agaricus bisporus.

Authors:  M C Harmsen; F H Schuren; S M Moukha; C M van Zuilen; P J Punt; J G Wessels
Journal:  Curr Genet       Date:  1992-12       Impact factor: 3.886

8.  Isolation and purification of pyranose 2-oxidase from Phanerochaete chrysosporium and characterization of gene structure and regulation.

Authors:  Theodorus H de Koker; Michael D Mozuch; Daniel Cullen; Jill Gaskell; Philip J Kersten
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

9.  Ancestral gene fusion in cellobiose dehydrogenases reflects a specific evolution of GMC oxidoreductases in fungi.

Authors:  Marcel Zámocký; Martin Hallberg; Roland Ludwig; Christina Divne; Dietmar Haltrich
Journal:  Gene       Date:  2004-08-18       Impact factor: 3.688

10.  Characterization of pyranose dehydrogenase from Agaricus meleagris and its application in the C-2 specific conversion of D-galactose.

Authors:  Christoph Sygmund; Roman Kittl; Jindrich Volc; Petr Halada; Elena Kubátová; Dietmar Haltrich; Clemens K Peterbauer
Journal:  J Biotechnol       Date:  2007-11-09       Impact factor: 3.307

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  11 in total

1.  Simple and efficient expression of Agaricus meleagris pyranose dehydrogenase in Pichia pastoris.

Authors:  Christoph Sygmund; Alexander Gutmann; Iris Krondorfer; Magdalena Kujawa; Anton Glieder; Beate Pscheidt; Dietmar Haltrich; Clemens Peterbauer; Roman Kittl
Journal:  Appl Microbiol Biotechnol       Date:  2011-11-13       Impact factor: 4.813

2.  Engineering of pyranose dehydrogenase for increased oxygen reactivity.

Authors:  Iris Krondorfer; Katharina Lipp; Dagmar Brugger; Petra Staudigl; Christoph Sygmund; Dietmar Haltrich; Clemens K Peterbauer
Journal:  PLoS One       Date:  2014-03-10       Impact factor: 3.240

3.  Characterization of three pyranose dehydrogenase isoforms from the litter-decomposing basidiomycete Leucoagaricus meleagris (syn. Agaricus meleagris).

Authors:  Michael M H Graf; Sandra Weber; Daniel Kracher; Roman Kittl; Christoph Sygmund; Roland Ludwig; Clemens Peterbauer; Dietmar Haltrich
Journal:  Appl Microbiol Biotechnol       Date:  2016-12-19       Impact factor: 4.813

4.  The GMC superfamily of oxidoreductases revisited: analysis and evolution of fungal GMC oxidoreductases.

Authors:  Leander Sützl; Gabriel Foley; Elizabeth M J Gillam; Mikael Bodén; Dietmar Haltrich
Journal:  Biotechnol Biofuels       Date:  2019-05-10       Impact factor: 7.670

5.  Versatile Oxidase and Dehydrogenase Activities of Bacterial Pyranose 2-Oxidase Facilitate Redox Cycling with Manganese Peroxidase In Vitro.

Authors:  Peter L Herzog; Leander Sützl; Beate Eisenhut; Daniel Maresch; Dietmar Haltrich; Christian Obinger; Clemens K Peterbauer
Journal:  Appl Environ Microbiol       Date:  2019-06-17       Impact factor: 4.792

6.  Targeting Penicillium expansum GMC Oxidoreductase with High Affinity Small Molecules for Reducing Patulin Production.

Authors:  Vincenzo Tragni; Pietro Cotugno; Anna De Grassi; Maria Maddalena Cavalluzzi; Annamaria Mincuzzi; Giovanni Lentini; Simona Marianna Sanzani; Antonio Ippolito; Ciro Leonardo Pierri
Journal:  Biology (Basel)       Date:  2020-12-31

7.  The 1.6 Å crystal structure of pyranose dehydrogenase from Agaricus meleagris rationalizes substrate specificity and reveals a flavin intermediate.

Authors:  Tien Chye Tan; Oliver Spadiut; Thanyaporn Wongnate; Jeerus Sucharitakul; Iris Krondorfer; Christoph Sygmund; Dietmar Haltrich; Pimchai Chaiyen; Clemens K Peterbauer; Christina Divne
Journal:  PLoS One       Date:  2013-01-09       Impact factor: 3.240

8.  Further insights into the catalytical properties of deglycosylated pyranose dehydrogenase from Agaricus meleagris recombinantly expressed in Pichia pastoris.

Authors:  Maria E Yakovleva; Anikó Killyéni; Oliver Seubert; Peter O Conghaile; Domhnall Macaodha; Dónal Leech; Christoph Gonaus; Ionel Catalin Popescu; Clemens K Peterbauer; Sven Kjellström; Lo Gorton
Journal:  Anal Chem       Date:  2013-09-25       Impact factor: 6.986

9.  Pyranose Dehydrogenase from Agaricus campestris and Agaricus xanthoderma: Characterization and Applications in Carbohydrate Conversions.

Authors:  Petra Staudigl; Iris Krondorfer; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Biomolecules       Date:  2013-08-16

Review 10.  Multiplicity of enzymatic functions in the CAZy AA3 family.

Authors:  Leander Sützl; Christophe V F P Laurent; Annabelle T Abrera; Georg Schütz; Roland Ludwig; Dietmar Haltrich
Journal:  Appl Microbiol Biotechnol       Date:  2018-02-06       Impact factor: 4.813

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