Literature DB >> 1473176

Sequence analysis of the glyceraldehyde-3-phosphate dehydrogenase genes from the basidiomycetes Schizophyllum commune, Phanerochaete chrysosporium and Agaricus bisporus.

M C Harmsen1, F H Schuren, S M Moukha, C M van Zuilen, P J Punt, J G Wessels.   

Abstract

GPD genes encoding glyceraldehyde-3-phosphate dehydrogenase were isolated from the homobasidiomycetes Schizophyllum commune, Phanerochaete chrysosporium and Agaricus bisporus. All three species contain one transcriptionally active GPD gene, but A. bisporus also contains an inactive GPD gene (tandemly linked to the active gene). These genes contain 5-9 introns located at conserved positions, differing (except in one case) from intron positions in ascomycetous GPD genes. The predicted amino-acid sequences of the proteins encoded by the three active GPD genes are highly homologous. A comparison with protein sequences from filamentous ascomycetes shows a clear distinction, whereas the GPD genes from ascomycetous yeasts are quite distinct from both the filamentous ascomycetes and basidiomycetes. Promoter regions of ascomycetous GPD genes do not correspond to those of the GPD genes of basidiomycetes which may (partly) explain poor expression in basidiomycetes of introduced genes driven by an ascomycete GPD promoter.

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Year:  1992        PMID: 1473176     DOI: 10.1007/bf00326409

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  36 in total

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Journal:  J Biol Chem       Date:  1953-02       Impact factor: 5.157

2.  Kluyveromyces lactis glyceraldehyde-3-phosphate dehydrogenase and alcohol dehydrogenase-1 genes are linked and divergently transcribed.

Authors:  J R Shuster
Journal:  Nucleic Acids Res       Date:  1990-07-25       Impact factor: 16.971

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Authors:  J A Lake
Journal:  Mol Biol Evol       Date:  1987-03       Impact factor: 16.240

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Authors:  B E Davidson; M Sajgò; H F Noller; J I Harris
Journal:  Nature       Date:  1967-12-23       Impact factor: 49.962

Review 5.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

6.  Isolation and characterization of the glyceraldehyde-3-phosphate dehydrogenase gene of Aspergillus nidulans.

Authors:  P J Punt; M A Dingemanse; B J Jacobs-Meijsing; P H Pouwels; C A van den Hondel
Journal:  Gene       Date:  1988-09-15       Impact factor: 3.688

7.  Genomic sequencing.

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Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

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Authors:  J Y Tso; X H Sun; R Wu
Journal:  J Biol Chem       Date:  1985-07-05       Impact factor: 5.157

9.  The trpC gene of Phanerochaete chrysosporium is unique in containing an intron but nevertheless maintains the order of functional domains seen in other fungi.

Authors:  A Schrank; C Tempelaars; P F Sims; S G Oliver; P Broda
Journal:  Mol Microbiol       Date:  1991-02       Impact factor: 3.501

10.  Complete sequence of the chicken glyceraldehyde-3-phosphate dehydrogenase gene.

Authors:  E M Stone; K N Rothblum; M C Alevy; T M Kuo; R J Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

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  27 in total

Review 1.  Developments in fungal taxonomy.

Authors:  J Guarro; A M Stchigel
Journal:  Clin Microbiol Rev       Date:  1999-07       Impact factor: 26.132

2.  Identification of some ectomycorrhizal basidiomycetes by PCR amplification of their gpd (glyceraldehyde-3-phosphate dehydrogenase) genes.

Authors:  N Kreuzinger; R Podeu; F Gruber; F Göbl; C P Kubicek
Journal:  Appl Environ Microbiol       Date:  1996-09       Impact factor: 4.792

3.  Homology-dependent silencing of the SC3 gene in Schizophyllum commune.

Authors:  T A Schuurs; E A Schaeffer; J G Wessels
Journal:  Genetics       Date:  1997-10       Impact factor: 4.562

4.  Isolation of expressed sequence tags of Agaricus bisporus and their assignment to chromosomes.

Authors:  A S Sonnenberg; P W de Groot; P J Schaap; J J Baars; J Visser; L J Van Griensven
Journal:  Appl Environ Microbiol       Date:  1996-12       Impact factor: 4.792

5.  The green fluorescent protein gene functions as a reporter of gene expression in Phanerochaete chrysosporium.

Authors:  B Ma; M B Mayfield; M H Gold
Journal:  Appl Environ Microbiol       Date:  2001-02       Impact factor: 4.792

6.  The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies.

Authors:  Sreedhar Kilaru; Patrik J Hoegger; Ursula Kües
Journal:  Curr Genet       Date:  2006-04-28       Impact factor: 3.886

7.  The Claviceps purpurea glyceraldehyde-3-phosphate dehydrogenase gene: cloning, characterization, and use for the improvement of a dominant selection system.

Authors:  U Jungehülsing; C Arntz; R Smit; P Tudzynski
Journal:  Curr Genet       Date:  1994-02       Impact factor: 3.886

8.  The cel3 gene of Agaricus bisporus codes for a modular cellulase and is transcriptionally regulated by the carbon source.

Authors:  C M Chow; E Yagüe; S Raguz; D A Wood; C F Thurston
Journal:  Appl Environ Microbiol       Date:  1994-08       Impact factor: 4.792

9.  Cloning and characterization of two allelic glyceraldehyde-3-phosphate dehydrogenase genes in Auricularia auricula-judae.

Authors:  Xiuzhi Fan; Yan Zhou; Yang Xiao; Yinbing Bian
Journal:  World J Microbiol Biotechnol       Date:  2013-07-23       Impact factor: 3.312

10.  Molecular cloning of three pyranose dehydrogenase-encoding genes from Agaricus meleagris and analysis of their expression by real-time RT-PCR.

Authors:  Roman Kittl; Christoph Sygmund; Petr Halada; Jindrich Volc; Christina Divne; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Curr Genet       Date:  2007-12-20       Impact factor: 3.886

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