Literature DB >> 16775746

The laccase multi-gene family in Coprinopsis cinerea has seventeen different members that divide into two distinct subfamilies.

Sreedhar Kilaru1, Patrik J Hoegger, Ursula Kües.   

Abstract

Seventeen non-allelic laccase genes and one gene footprint are present in the genome of Coprinopsis cinerea. Two gene subfamilies were defined by intron positions and similarity of deduced gene products, one with 15 members (lcc1-lcc15) and one with 2 members (lcc16, lcc17). The first subfamily divides in the phylogenetic tree of deduced proteins into smaller clusters that probably reflect recent gene duplication events. Different laccase genes diverged from each other both by frequent synonymous and non-synonymous codon changes. Mainly synonymous codon changes accumulate in alleles, with up to 12% total codon differences between given pairs of alleles. Overexpression of the 17 laccase genes under the control of a constitutive promoter identified nine active enzymes from subfamily 1. All of these showed laccase activities with DMP (2,6-dimethoxy phenol) as substrate but only eight of them also with ABTS [2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid)]. Lcc16 and Lcc17 share certain sequence features with ferroxidases but enzyme assays failed to show such activity. Lcc15 is expected to be non-functional in laccase activity due to an internal deletion of about 150 amino acids. Transcripts were obtained from all genes but splice junctions for three genes were not congruent with translation into a functional protein.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16775746     DOI: 10.1007/s00294-006-0074-1

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  53 in total

1.  Three subfamilies of pheromone and receptor genes generate multiple B mating specificities in the mushroom Coprinus cinereus.

Authors:  J R Halsall; M J Milner; L A Casselton
Journal:  Genetics       Date:  2000-03       Impact factor: 4.562

Review 2.  The contribution of melanin to microbial pathogenesis.

Authors:  Joshua D Nosanchuk; Arturo Casadevall
Journal:  Cell Microbiol       Date:  2003-04       Impact factor: 3.715

3.  Combined sequence and structure analysis of the fungal laccase family.

Authors:  S V Suresh Kumar; Prashant S Phale; S Durani; Pramod P Wangikar
Journal:  Biotechnol Bioeng       Date:  2003-08-20       Impact factor: 4.530

4.  Molecular analysis of the Coprinus cinereus mating type A factor demonstrates an unexpectedly complex structure.

Authors:  G May; L Le Chevanton; P J Pukkila
Journal:  Genetics       Date:  1991-07       Impact factor: 4.562

5.  Targeted mutations in a Trametes villosa laccase. Axial perturbations of the T1 copper.

Authors:  F Xu; A E Palmer; D S Yaver; R M Berka; G A Gambetta; S H Brown; E I Solomon
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

6.  The essential role of Glu-185 and Tyr-354 residues in the ferroxidase activity of Saccharomyces cerevisiae Fet3.

Authors:  M C Bonaccorsi di Patti; M R Felice; A P Camuti; A Lania; G Musci
Journal:  FEBS Lett       Date:  2000-04-28       Impact factor: 4.124

7.  Crystal structure of a laccase from the fungus Trametes versicolor at 1.90-A resolution containing a full complement of coppers.

Authors:  Klaus Piontek; Matteo Antorini; Thomas Choinowski
Journal:  J Biol Chem       Date:  2002-08-05       Impact factor: 5.157

8.  Sequence analysis of the glyceraldehyde-3-phosphate dehydrogenase genes from the basidiomycetes Schizophyllum commune, Phanerochaete chrysosporium and Agaricus bisporus.

Authors:  M C Harmsen; F H Schuren; S M Moukha; C M van Zuilen; P J Punt; J G Wessels
Journal:  Curr Genet       Date:  1992-12       Impact factor: 3.886

9.  Characterization of a multicopper oxidase gene cluster in Phanerochaete chrysosporium and evidence of altered splicing of the mco transcripts.

Authors:  Luis F Larrondo; Bernardo González; Dan Cullen; Rafael Vicuña
Journal:  Microbiology (Reading)       Date:  2004-08       Impact factor: 2.777

10.  DNA-mediated transformation of the basidiomycete Coprinus cinereus.

Authors:  D M Binninger; C Skrzynia; P J Pukkila; L A Casselton
Journal:  EMBO J       Date:  1987-04       Impact factor: 11.598

View more
  50 in total

1.  Purification and characterization of a laccase from Coprinopsis cinerea in Pichia pastoris.

Authors:  Bo Wang; Lijuan Wang; Yaqiu Lin; Qing Han; Jing Han; Jianjie Gao; Yongsheng Tian; Wei Zhao; Rihe Peng; Quanhong Yao
Journal:  World J Microbiol Biotechnol       Date:  2013-11-01       Impact factor: 3.312

2.  Are basidiomycete laccase gene abundance and composition related to reduced lignolytic activity under elevated atmospheric NO3(-) deposition in a northern hardwood forest?

Authors:  John E Hassett; Donald R Zak; Christopher B Blackwood; Kurt S Pregitzer
Journal:  Microb Ecol       Date:  2008-09-13       Impact factor: 4.552

Review 3.  Laccases: a never-ending story.

Authors:  Paola Giardina; Vincenza Faraco; Cinzia Pezzella; Alessandra Piscitelli; Sophie Vanhulle; Giovanni Sannia
Journal:  Cell Mol Life Sci       Date:  2009-10-22       Impact factor: 9.261

4.  Phylogenomic analyses reveal the diversity of laccase-coding genes in Fonsecaea genomes.

Authors:  Leandro Ferreira Moreno; Peiying Feng; Vinicius Almir Weiss; Vania Aparecida Vicente; J Benjamin Stielow; Sybren de Hoog
Journal:  PLoS One       Date:  2017-02-10       Impact factor: 3.240

5.  Laccase detoxification mediates the nutritional alliance between leaf-cutting ants and fungus-garden symbionts.

Authors:  Henrik H De Fine Licht; Morten Schiøtt; Adelina Rogowska-Wrzesinska; Sanne Nygaard; Peter Roepstorff; Jacobus J Boomsma
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-24       Impact factor: 11.205

6.  Alternative Splicing of Heat Shock Transcription Factor 2 Regulates the Expression of Laccase Gene Family in Response to Copper in Trametes trogii.

Authors:  Yu Zhang; Yuanyuan Wu; Xulei Yang; En Yang; Huini Xu; Yuhui Chen; Irbis Chagan; Jinping Yan
Journal:  Appl Environ Microbiol       Date:  2021-02-12       Impact factor: 4.792

7.  Redundancy among manganese peroxidases in Pleurotus ostreatus.

Authors:  Tomer M Salame; Doriv Knop; Dana Levinson; Oded Yarden; Yitzhak Hadar
Journal:  Appl Environ Microbiol       Date:  2013-02-01       Impact factor: 4.792

8.  Induction of laccases in Trametes versicolor by aqueous wood extracts.

Authors:  Brandt Bertrand; Fernando Martínez-Morales; Raunel Tinoco; Sonia Rojas-Trejo; Leobardo Serrano-Carreón; María R Trejo-Hernández
Journal:  World J Microbiol Biotechnol       Date:  2013-07-17       Impact factor: 3.312

9.  Molecular cloning of three pyranose dehydrogenase-encoding genes from Agaricus meleagris and analysis of their expression by real-time RT-PCR.

Authors:  Roman Kittl; Christoph Sygmund; Petr Halada; Jindrich Volc; Christina Divne; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Curr Genet       Date:  2007-12-20       Impact factor: 3.886

10.  The Pleurotus ostreatus laccase multi-gene family: isolation and heterologous expression of new family members.

Authors:  Cinzia Pezzella; Flavia Autore; Paola Giardina; Alessandra Piscitelli; Giovanni Sannia; Vincenza Faraco
Journal:  Curr Genet       Date:  2008-11-26       Impact factor: 3.886

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.