Literature DB >> 18095367

Frontiers in glycomics: bioinformatics and biomarkers in disease. An NIH white paper prepared from discussions by the focus groups at a workshop on the NIH campus, Bethesda MD (September 11-13, 2006).

Nicolle H Packer1, Claus-Wilhelm von der Lieth, Kiyoko F Aoki-Kinoshita, Carlito B Lebrilla, James C Paulson, Rahul Raman, Pauline Rudd, Ram Sasisekharan, Naoyuki Taniguchi, William S York.   

Abstract

Key issues relating to glycomics research were discussed after the workshop entitled "Frontiers in Glycomics: Bioinformatics and Biomarkers in Disease" by two focus groups nominated by the organizers. The groups focused on two themes: (i) glycomics as the new frontier for the discovery of biomarkers of disease and (ii) requirements for the development of informatics for glycomics and glycobiology. The mandate of the focus groups was to build consensus on these issues and develop a summary of findings and recommendations for presentation to the NIH and the greater scientific community. A list of scientific priorities was developed, presented, and discussed at the workshops. Additional suggestions were solicited from workshop participants and collected using the workshop mailing list. The results are summarized in this White Paper, authored by the co-chairs of the focus groups.

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Year:  2008        PMID: 18095367     DOI: 10.1002/pmic.200700917

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  54 in total

1.  N-Glycan profiling of dried blood spots.

Authors:  L Renee Ruhaak; Suzanne Miyamoto; Karen Kelly; Carlito B Lebrilla
Journal:  Anal Chem       Date:  2011-12-19       Impact factor: 6.986

2.  Reliable LC-MS quantitative glycomics using iGlycoMab stable isotope labeled glycans as internal standards.

Authors:  Shiyue Zhou; Nadia Tello; Alex Harvey; Barry Boyes; Ron Orlando; Yehia Mechref
Journal:  Electrophoresis       Date:  2016-04-09       Impact factor: 3.535

Review 3.  Mass spectrometry and the emerging field of glycomics.

Authors:  Joseph Zaia
Journal:  Chem Biol       Date:  2008-09-22

4.  GlycoRDF: an ontology to standardize glycomics data in RDF.

Authors:  Rene Ranzinger; Kiyoko F Aoki-Kinoshita; Matthew P Campbell; Shin Kawano; Thomas Lütteke; Shujiro Okuda; Daisuke Shinmachi; Toshihide Shikanai; Hiromichi Sawaki; Philip Toukach; Masaaki Matsubara; Issaku Yamada; Hisashi Narimatsu
Journal:  Bioinformatics       Date:  2014-11-11       Impact factor: 6.937

5.  Evaluation of glycomic profiling as a diagnostic biomarker for epithelial ovarian cancer.

Authors:  Kyoungmi Kim; L Renee Ruhaak; Uyen Thao Nguyen; Sandra L Taylor; Lauren Dimapasoc; Cynthia Williams; Carol Stroble; Sureyya Ozcan; Suzanne Miyamoto; Carlito B Lebrilla; Gary S Leiserowitz
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2014-02-20       Impact factor: 4.254

Review 6.  Glycomics and disease markers.

Authors:  Hyun Joo An; Scott R Kronewitter; Maria Lorna A de Leoz; Carlito B Lebrilla
Journal:  Curr Opin Chem Biol       Date:  2009-09-21       Impact factor: 8.822

7.  The glycolyzer: automated glycan annotation software for high performance mass spectrometry and its application to ovarian cancer glycan biomarker discovery.

Authors:  Scott R Kronewitter; Maria Lorna A De Leoz; John S Strum; Hyun Joo An; Lauren M Dimapasoc; Andrés Guerrero; Suzanne Miyamoto; Carlito B Lebrilla; Gary S Leiserowitz
Journal:  Proteomics       Date:  2012-08       Impact factor: 3.984

8.  From the gamma-glutamyl cycle to the glycan cycle: a road with many turns and pleasant surprises.

Authors:  Naoyuki Taniguchi
Journal:  J Biol Chem       Date:  2009-10-19       Impact factor: 5.157

Review 9.  Bioinformatics and molecular modeling in glycobiology.

Authors:  Martin Frank; Siegfried Schloissnig
Journal:  Cell Mol Life Sci       Date:  2010-04-04       Impact factor: 9.261

10.  Profile of native N-linked glycan structures from human serum using high performance liquid chromatography on a microfluidic chip and time-of-flight mass spectrometry.

Authors:  Caroline S Chu; Milady R Niñonuevo; Brian H Clowers; Patrick D Perkins; Hyun Joo An; Hongfeng Yin; Kevin Killeen; Suzanne Miyamoto; Rudolf Grimm; Carlito B Lebrilla
Journal:  Proteomics       Date:  2009-04       Impact factor: 3.984

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