Literature DB >> 19775929

Glycomics and disease markers.

Hyun Joo An1, Scott R Kronewitter, Maria Lorna A de Leoz, Carlito B Lebrilla.   

Abstract

Glycomics is the comprehensive study of all glycans expressed in biological systems. The biosynthesis of glycan relies on a number of highly competitive processes involving glycosyl transferases. Glycosylation is therefore highly sensitive to the biochemical environment and has been implicated in many diseases including cancer. Recently, interest in profiling the glycome has increased owing to the potential of glycans for disease markers. In this regard, mass spectrometry is emerging as a powerful technique for profiling the glycome. Global glycan profiling of human serum based on mass spectrometry has already led to several potentially promising markers for several types of cancer and diseases.

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Year:  2009        PMID: 19775929      PMCID: PMC2788081          DOI: 10.1016/j.cbpa.2009.08.015

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  51 in total

1.  Comparative serum glycoproteomics using lectin selected sialic acid glycoproteins with mass spectrometric analysis: application to pancreatic cancer serum.

Authors:  Jia Zhao; Diane M Simeone; David Heidt; Michelle A Anderson; David M Lubman
Journal:  J Proteome Res       Date:  2006-07       Impact factor: 4.466

2.  Different glycan structures in prostate-specific antigen from prostate cancer sera in relation to seminal plasma PSA.

Authors:  Glòria Tabarés; Catherine M Radcliffe; Sílvia Barrabés; Manel Ramírez; R Núria Aleixandre; Wolfgang Hoesel; Raymond A Dwek; Pauline M Rudd; Rosa Peracaula; Rafael de Llorens
Journal:  Glycobiology       Date:  2005-09-21       Impact factor: 4.313

3.  Profiling of glycans in serum for the discovery of potential biomarkers for ovarian cancer.

Authors:  Hyun Joo An; Suzanne Miyamoto; Katherine S Lancaster; Crystal Kirmiz; Bensheng Li; Kit S Lam; Gary S Leiserowitz; Carlito B Lebrilla
Journal:  J Proteome Res       Date:  2006-07       Impact factor: 4.466

4.  Glycomics analyses of tear fluid for the diagnostic detection of ocular rosacea.

Authors:  Hyun Joo An; Milady Ninonuevo; Jennifer Aguilan; Hao Liu; Carlito B Lebrilla; Lenio S Alvarenga; Mark J Mannis
Journal:  J Proteome Res       Date:  2005 Nov-Dec       Impact factor: 4.466

Review 5.  Glycans in cancer and inflammation--potential for therapeutics and diagnostics.

Authors:  Danielle H Dube; Carolyn R Bertozzi
Journal:  Nat Rev Drug Discov       Date:  2005-06       Impact factor: 84.694

6.  Rapid and sensitive screening of N-glycans as 9-fluorenylmethyl derivatives by high-performance liquid chromatography: a method which can recover free oligosaccharides after analysis.

Authors:  Satoru Kamoda; Miyako Nakano; Rika Ishikawa; Shigeo Suzuki; Kazuaki Kakehi
Journal:  J Proteome Res       Date:  2005 Jan-Feb       Impact factor: 4.466

Review 7.  The sweet and sour of cancer: glycans as novel therapeutic targets.

Authors:  Mark M Fuster; Jeffrey D Esko
Journal:  Nat Rev Cancer       Date:  2005-07       Impact factor: 60.716

Review 8.  Application of Fourier transform ion cyclotron resonance mass spectrometry to oligosaccharides.

Authors:  Youmie Park; Carlito B Lebrilla
Journal:  Mass Spectrom Rev       Date:  2005 Mar-Apr       Impact factor: 10.946

9.  Profiling the morphological distribution of O-linked oligosaccharides.

Authors:  Jinhua Zhang; Yongming Xie; Jerry L Hedrick; Carlito B Lebrilla
Journal:  Anal Biochem       Date:  2004-11-01       Impact factor: 3.365

10.  The glycan moiety of human pancreatic lithostathine. Structure characterization and possible pathophysiological implications.

Authors:  M De Reggi; C Capon; B Gharib; J M Wieruszeski; R Michel; B Fournet
Journal:  Eur J Biochem       Date:  1995-06-01
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  103 in total

1.  Extensive determination of glycan heterogeneity reveals an unusual abundance of high mannose glycans in enriched plasma membranes of human embryonic stem cells.

Authors:  Hyun Joo An; Phung Gip; Jaehan Kim; Shuai Wu; Kun Wook Park; Cheryl T McVaugh; David V Schaffer; Carolyn R Bertozzi; Carlito B Lebrilla
Journal:  Mol Cell Proteomics       Date:  2011-12-06       Impact factor: 5.911

Review 2.  Vertebrate protein glycosylation: diversity, synthesis and function.

Authors:  Kelley W Moremen; Michael Tiemeyer; Alison V Nairn
Journal:  Nat Rev Mol Cell Biol       Date:  2012-06-22       Impact factor: 94.444

3.  Novel cleavage of reductively aminated glycan-tags by N-bromosuccinimide to regenerate free, reducing glycans.

Authors:  Xuezheng Song; Brian A Johns; Hong Ju; Yi Lasanajak; Chunmei Zhao; David F Smith; Richard D Cummings
Journal:  ACS Chem Biol       Date:  2013-09-13       Impact factor: 5.100

4.  Top-down quantitative proteomics identified phosphorylation of cardiac troponin I as a candidate biomarker for chronic heart failure.

Authors:  Jiang Zhang; Moltu J Guy; Holly S Norman; Yi-Chen Chen; Qingge Xu; Xintong Dong; Huseyin Guner; Sijian Wang; Takushi Kohmoto; Ken H Young; Richard L Moss; Ying Ge
Journal:  J Proteome Res       Date:  2011-07-28       Impact factor: 4.466

5.  Specific Identification of Glycoproteins Bearing the Tn Antigen in Human Cells.

Authors:  Jiangnan Zheng; Haopeng Xiao; Ronghu Wu
Journal:  Angew Chem Int Ed Engl       Date:  2017-05-17       Impact factor: 15.336

6.  Serum glycan signatures of gastric cancer.

Authors:  Sureyya Ozcan; Donald A Barkauskas; L Renee Ruhaak; Javier Torres; Cara L Cooke; Hyun Joo An; Serenus Hua; Cynthia C Williams; Lauren M Dimapasoc; Jae Han Kim; Margarita Camorlinga-Ponce; David Rocke; Carlito B Lebrilla; Jay V Solnick
Journal:  Cancer Prev Res (Phila)       Date:  2013-12-10

7.  Comparative glycomic profiling of isotopically permethylated N-glycans by liquid chromatography/electrospray ionization mass spectrometry.

Authors:  Yunli Hu; Janie L Desantos-Garcia; Yehia Mechref
Journal:  Rapid Commun Mass Spectrom       Date:  2013-04-30       Impact factor: 2.419

8.  A workflow for large-scale empirical identification of cell wall N-linked glycoproteins of tomato (Solanum lycopersicum) fruit by tandem mass spectrometry.

Authors:  Theodore W Thannhauser; Miaoqing Shen; Robert Sherwood; Kevin Howe; Tara Fish; Yong Yang; Wei Chen; Sheng Zhang
Journal:  Electrophoresis       Date:  2013-08       Impact factor: 3.535

9.  Characterization of Electrospray Ionization (ESI) Parameters on In-ESI Hydrogen/Deuterium Exchange of Carbohydrate-Metal Ion Adducts.

Authors:  O Tara Liyanage; Matthew R Brantley; Emvia I Calixte; Touradj Solouki; Kevin L Shuford; Elyssia S Gallagher
Journal:  J Am Soc Mass Spectrom       Date:  2018-10-23       Impact factor: 3.109

10.  The glycolyzer: automated glycan annotation software for high performance mass spectrometry and its application to ovarian cancer glycan biomarker discovery.

Authors:  Scott R Kronewitter; Maria Lorna A De Leoz; John S Strum; Hyun Joo An; Lauren M Dimapasoc; Andrés Guerrero; Suzanne Miyamoto; Carlito B Lebrilla; Gary S Leiserowitz
Journal:  Proteomics       Date:  2012-08       Impact factor: 3.984

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