Literature DB >> 18087756

Problems with the current deinococcal hypothesis: an alternative theory.

Haïtham Sghaier1, Issay Narumi, Katsuya Satoh, Hirofumi Ohba, Hiroshi Mitomo.   

Abstract

All theories related to the evolution of Deinococcus radiodurans have a common denominator: the strong positive correlation between ionizing-radiation resistance and desiccation tolerance. Currently, the widespread hypothesis is that D. radiodurans' ionizing-radiation resistance is a consequence of this organism's adaptation to desiccation (desiccation adaptation hypothesis). Here, we draw attention to major discrepancy that has emerged between the "desiccation adaptation hypothesis" and recent findings in computational biology, experimental research, and terrestrial subsurface surveys. We explain why the alternative hypothesis, suggesting that D. radiodurans' desiccation tolerance could be a consequence of this organism's adaptation to ionizing radiation (radiation adaptation hypothesis), should be considered on equal basis with the "desiccation adaptation hypothesis".

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Year:  2007        PMID: 18087756     DOI: 10.1007/s12064-007-0004-x

Source DB:  PubMed          Journal:  Theory Biosci        ISSN: 1431-7613            Impact factor:   1.919


  15 in total

1.  Inferring genome trees by using a filter to eliminate phylogenetically discordant sequences and a distance matrix based on mean normalized BLASTP scores.

Authors:  G D Paul Clarke; Robert G Beiko; Mark A Ragan; Robert L Charlebois
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

2.  Distributions of microbial activities in deep subseafloor sediments.

Authors:  Steven D'Hondt; Bo Barker Jørgensen; D Jay Miller; Anja Batzke; Ruth Blake; Barry A Cragg; Heribert Cypionka; Gerald R Dickens; Timothy Ferdelman; Kai-Uwe Hinrichs; Nils G Holm; Richard Mitterer; Arthur Spivack; Guizhi Wang; Barbara Bekins; Bert Engelen; Kathryn Ford; Glen Gettemy; Scott D Rutherford; Henrik Sass; C Gregory Skilbeck; Ivano W Aiello; Gilles Guèrin; Christopher H House; Fumio Inagaki; Patrick Meister; Thomas Naehr; Sachiko Niitsuma; R John Parkes; Axel Schippers; David C Smith; Andreas Teske; Juergen Wiegel; Christian Naranjo Padilla; Juana Luz Solis Acosta
Journal:  Science       Date:  2004-12-24       Impact factor: 47.728

3.  A minimal estimate for the gene content of the last universal common ancestor--exobiology from a terrestrial perspective.

Authors:  Christos A Ouzounis; Victor Kunin; Nikos Darzentas; Leon Goldovsky
Journal:  Res Microbiol       Date:  2005-12-19       Impact factor: 3.992

Review 4.  Bacterial evolution.

Authors:  C R Woese
Journal:  Microbiol Rev       Date:  1987-06

5.  Repair of extensive ionizing-radiation DNA damage at 95 degrees C in the hyperthermophilic archaeon Pyrococcus furiosus.

Authors:  J DiRuggiero; N Santangelo; Z Nackerdien; J Ravel; F T Robb
Journal:  J Bacteriol       Date:  1997-07       Impact factor: 3.490

6.  Dictyostelium discoideum: a gamma-ray resistant organism.

Authors:  R A Deering
Journal:  Science       Date:  1968-12-13       Impact factor: 47.728

Review 7.  Deinococcus radiodurans - the consummate survivor.

Authors:  Michael M Cox; John R Battista
Journal:  Nat Rev Microbiol       Date:  2005-11       Impact factor: 60.633

8.  Accumulation of Mn(II) in Deinococcus radiodurans facilitates gamma-radiation resistance.

Authors:  M J Daly; E K Gaidamakova; V Y Matrosova; A Vasilenko; M Zhai; A Venkateswaran; M Hess; M V Omelchenko; H M Kostandarithes; K S Makarova; L P Wackett; J K Fredrickson; D Ghosal
Journal:  Science       Date:  2004-09-30       Impact factor: 47.728

9.  Radioresistance of Deinococcus radiodurans: functions necessary to survive ionizing radiation are also necessary to survive prolonged desiccation.

Authors:  V Mattimore; J R Battista
Journal:  J Bacteriol       Date:  1996-02       Impact factor: 3.490

10.  Physiological responses of the hyperthermophilic archaeon "Pyrococcus abyssi" to DNA damage caused by ionizing radiation.

Authors:  Edmond Jolivet; Fujihiko Matsunaga; Yoshizumi Ishino; Patrick Forterre; Daniel Prieur; Hannu Myllykallio
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

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  8 in total

1.  Description of gamma radiation-resistant Geodermatophilus dictyosporus sp. nov. to accommodate the not validly named Geodermatophilus obscurus subsp. dictyosporus (Luedemann, 1968).

Authors:  Maria del Carmen Montero-Calasanz; Karima Hezbri; Markus Göker; Haïtham Sghaier; Manfred Rohde; Cathrin Spröer; Peter Schumann; Hans-Peter Klenk
Journal:  Extremophiles       Date:  2014-11-16       Impact factor: 2.395

Review 2.  Oxidative stress resistance in Deinococcus radiodurans.

Authors:  Dea Slade; Miroslav Radman
Journal:  Microbiol Mol Biol Rev       Date:  2011-03       Impact factor: 11.056

3.  Streptococcus pneumoniae is desiccation tolerant and infectious upon rehydration.

Authors:  Rebecca L Walsh; Andrew Camilli
Journal:  mBio       Date:  2011-05-24       Impact factor: 7.867

4.  Roots of the xerophyte Panicum turgidum host a cohort of ionizing-radiation-resistant biotechnologically-valuable bacteria.

Authors:  Sihem Guesmi; Afef Najjari; Petar Pujic; Kais Ghedira; Rania Ouertani; Marwa Jabberi; Ameur Cherif; Philippe Normand; Haïtham Sghaier
Journal:  Saudi J Biol Sci       Date:  2021-09-16       Impact factor: 4.219

5.  Evolutionary potential, cross-stress behavior and the genetic basis of acquired stress resistance in Escherichia coli.

Authors:  Martin Dragosits; Vadim Mozhayskiy; Semarhy Quinones-Soto; Jiyeon Park; Ilias Tagkopoulos
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

6.  Basal DNA repair machinery is subject to positive selection in ionizing-radiation-resistant bacteria.

Authors:  Haïtham Sghaier; Kaïs Ghedira; Alia Benkahla; Insaf Barkallah
Journal:  BMC Genomics       Date:  2008-06-21       Impact factor: 3.969

7.  The PEG-responding desiccome of the alder microsymbiont Frankia alni.

Authors:  Kais Ghedira; Emna Harigua-Souiai; Cherif Ben Hamda; Pascale Fournier; Petar Pujic; Sihem Guesmi; Ikram Guizani; Guylaine Miotello; Jean Armengaud; Philippe Normand; Haïtham Sghaier
Journal:  Sci Rep       Date:  2018-01-15       Impact factor: 4.379

8.  On the Stability of Deinoxanthin Exposed to Mars Conditions during a Long-Term Space Mission and Implications for Biomarker Detection on Other Planets.

Authors:  Stefan Leuko; Maria Bohmeier; Franziska Hanke; Ute Böettger; Elke Rabbow; Andre Parpart; Petra Rettberg; Jean-Pierre P de Vera
Journal:  Front Microbiol       Date:  2017-09-15       Impact factor: 5.640

  8 in total

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