Literature DB >> 18087710

Systems biology and its potential role in radiobiology.

Ludwig Feinendegen1, Philip Hahnfeldt, Eric E Schadt, Michael Stumpf, Eberhard O Voit.   

Abstract

About a century ago, Conrad Röentgen discovered X-rays, and Henri Becquerel discovered a new phenomenon, which Marie and Pierre Curie later coined as radio-activity. Since their seminal work, we have learned much about the physical properties of radiation and its effects on living matter. Alas, the more we discover, the more we appreciate the complexity of the biological processes that are triggered by radiation exposure and eventually lead (or do not lead) to disease. Equipped with modern biological methods of high-throughput experimentation, imaging, and vastly increased computational prowess, we are now entering an era where we can piece some of the multifold aspects of radiation exposure and its sequelae together, and develop a more systemic understanding of radiogenic effects such as radio-carcinogenesis than has been possible in the past. It is evident from the complexity of even the known processes that such an understanding can only be gained if it is supported by mathematical models. At this point, the construction of comprehensive models is hampered both by technical inadequacies and a paucity of appropriate data. Nonetheless, some initial steps have been taken already and the generally increased interest in systems biology may be expected to speed up future progress. In this context, we discuss in this article examples of relatively small, yet very useful models that elucidate selected aspects of the effects of exposure to ionizing radiation and may shine a light on the path before us.

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Year:  2007        PMID: 18087710     DOI: 10.1007/s00411-007-0146-8

Source DB:  PubMed          Journal:  Radiat Environ Biophys        ISSN: 0301-634X            Impact factor:   1.925


  108 in total

Review 1.  Biologic responses to low doses of ionizing radiation: Detriment versus hormesis. Part 2. Dose responses of organisms.

Authors:  M Pollycove; L E Feinendegen
Journal:  J Nucl Med       Date:  2001-09       Impact factor: 10.057

2.  Relative implications of protective responses versus damage induction at low dose and low-dose-rate exposures, using the microdose approach.

Authors:  L E Feinendegen
Journal:  Radiat Prot Dosimetry       Date:  2003       Impact factor: 0.972

3.  Variation in gene expression within and among natural populations.

Authors:  Marjorie F Oleksiak; Gary A Churchill; Douglas L Crawford
Journal:  Nat Genet       Date:  2002-09-03       Impact factor: 38.330

4.  Integrating genotypic and expression data in a segregating mouse population to identify 5-lipoxygenase as a susceptibility gene for obesity and bone traits.

Authors:  Margarete Mehrabian; Hooman Allayee; Jirina Stockton; Pek Yee Lum; Thomas A Drake; Lawrence W Castellani; Michael Suh; Christopher Armour; Stephen Edwards; John Lamb; Aldons J Lusis; Eric E Schadt
Journal:  Nat Genet       Date:  2005-10-02       Impact factor: 38.330

5.  An integrative genomics approach to infer causal associations between gene expression and disease.

Authors:  Eric E Schadt; John Lamb; Xia Yang; Jun Zhu; Steve Edwards; Debraj Guhathakurta; Solveig K Sieberts; Stephanie Monks; Marc Reitman; Chunsheng Zhang; Pek Yee Lum; Amy Leonardson; Rolf Thieringer; Joseph M Metzger; Liming Yang; John Castle; Haoyuan Zhu; Shera F Kash; Thomas A Drake; Alan Sachs; Aldons J Lusis
Journal:  Nat Genet       Date:  2005-06-19       Impact factor: 38.330

Review 6.  Biological systems modeling and analysis: a biomolecular technique of the twenty-first century.

Authors:  Gautam Goel; I-Chun Chou; Eberhard O Voit
Journal:  J Biomol Tech       Date:  2006-09

7.  Adaptive response of human lymphocytes to low concentrations of radioactive thymidine.

Authors:  G Olivieri; J Bodycote; S Wolff
Journal:  Science       Date:  1984-02-10       Impact factor: 47.728

8.  Complement factor H variant increases the risk of age-related macular degeneration.

Authors:  Jonathan L Haines; Michael A Hauser; Silke Schmidt; William K Scott; Lana M Olson; Paul Gallins; Kylee L Spencer; Shu Ying Kwan; Maher Noureddine; John R Gilbert; Nathalie Schnetz-Boutaud; Anita Agarwal; Eric A Postel; Margaret A Pericak-Vance
Journal:  Science       Date:  2005-03-10       Impact factor: 47.728

Review 9.  Radioadaptive response revisited.

Authors:  Soile Tapio; Vesna Jacob
Journal:  Radiat Environ Biophys       Date:  2006-11-28       Impact factor: 1.925

10.  Low-LET-induced radioprotective mechanisms within a stochastic two-stage cancer model.

Authors:  H Schöllnberger; R D Stewart; R E J Mitchel
Journal:  Dose Response       Date:  2006-05-22       Impact factor: 2.658

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  8 in total

1.  The first international workshop on systems radiation biology: a new approach to solve old questions.

Authors:  Herwig G Paretzke
Journal:  Radiat Environ Biophys       Date:  2008-02       Impact factor: 1.925

Review 2.  Use of proteomics in radiobiological research: current state of the art.

Authors:  Soile Tapio; Sabine Hornhardt; Maria Gomolka; Dariusz Leszczynski; Anton Posch; Stefan Thalhammer; Michael J Atkinson
Journal:  Radiat Environ Biophys       Date:  2010-01-05       Impact factor: 1.925

3.  Mutation induction by inhaled radon progeny modeled at the tissue level.

Authors:  Balázs G Madas; Imre Balásházy
Journal:  Radiat Environ Biophys       Date:  2011-09-06       Impact factor: 1.925

4.  Immunological mechanism of the low-dose radiation-induced suppression of cancer metastases in a mouse model.

Authors:  Ewa M Nowosielska; Aneta Cheda; Jolanta Wrembel-Wargocka; Marek K Janiak
Journal:  Dose Response       Date:  2009-12-10       Impact factor: 2.658

5.  Time-series clustering of gene expression in irradiated and bystander fibroblasts: an application of FBPA clustering.

Authors:  Shanaz A Ghandhi; Anshu Sinha; Marianthi Markatou; Sally A Amundson
Journal:  BMC Genomics       Date:  2011-01-04       Impact factor: 3.969

Review 6.  Radiomic and radiogenomic modeling for radiotherapy: strategies, pitfalls, and challenges.

Authors:  James T T Coates; Giacomo Pirovano; Issam El Naqa
Journal:  J Med Imaging (Bellingham)       Date:  2021-03-23

7.  Dynamics of cellular responses to radiation.

Authors:  Dominik Wodarz; Ron Sorace; Natalia L Komarova
Journal:  PLoS Comput Biol       Date:  2014-04-10       Impact factor: 4.475

Review 8.  Big Data Analytics for Prostate Radiotherapy.

Authors:  James Coates; Luis Souhami; Issam El Naqa
Journal:  Front Oncol       Date:  2016-06-14       Impact factor: 6.244

  8 in total

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