Literature DB >> 18082423

Single particle analysis based on Zernike phase contrast transmission electron microscopy.

Radostin Danev1, Kuniaki Nagayama.   

Abstract

We present the first application of Zernike phase-contrast transmission electron microscopy to single-particle 3D reconstruction of a protein, using GroEL chaperonin as the test specimen. We evaluated the performance of the technique by comparing 3D models derived from Zernike phase contrast imaging, with models from conventional underfocus phase contrast imaging. The same resolution, about 12A, was achieved by both imaging methods. The reconstruction based on Zernike phase contrast data required about 30% fewer particles. The advantages and prospects of each technique are discussed.

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Year:  2007        PMID: 18082423     DOI: 10.1016/j.jsb.2007.10.015

Source DB:  PubMed          Journal:  J Struct Biol        ISSN: 1047-8477            Impact factor:   2.867


  32 in total

1.  Retrofit implementation of Zernike phase plate imaging for cryo-TEM.

Authors:  Michael Marko; Ardean Leith; Chyongere Hsieh; Radostin Danev
Journal:  J Struct Biol       Date:  2011-01-25       Impact factor: 2.867

2.  Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy.

Authors:  Anna-Clare Milazzo; Anchi Cheng; Arne Moeller; Dmitry Lyumkis; Erica Jacovetty; James Polukas; Mark H Ellisman; Nguyen-Huu Xuong; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2011-09-10       Impact factor: 2.867

3.  Methods for testing Zernike phase plates and a report on silicon-based phase plates with reduced charging and improved ageing characteristics.

Authors:  Michael Marko; Xing Meng; Chyongere Hsieh; James Roussie; Christopher Striemer
Journal:  J Struct Biol       Date:  2013-08-28       Impact factor: 2.867

Review 4.  Development of phase plates for electron microscopes and their biological application.

Authors:  Kuniaki Nagayama
Journal:  Eur Biophys J       Date:  2008-02-08       Impact factor: 1.733

5.  Macromolecular structures without crystals.

Authors:  Robert M Glaeser
Journal:  Proc Natl Acad Sci U S A       Date:  2008-02-06       Impact factor: 11.205

Review 6.  Retrospective on the early development of cryoelectron microscopy of macromolecules and a prospective on opportunities for the future.

Authors:  Kenneth A Taylor; Robert M Glaeser
Journal:  J Struct Biol       Date:  2008-06-19       Impact factor: 2.867

Review 7.  Invited review article: Methods for imaging weak-phase objects in electron microscopy.

Authors:  Robert M Glaeser
Journal:  Rev Sci Instrum       Date:  2013-11       Impact factor: 1.523

Review 8.  Reaching the information limit in cryo-EM of biological macromolecules: experimental aspects.

Authors:  Robert M Glaeser; Richard J Hall
Journal:  Biophys J       Date:  2011-05-18       Impact factor: 4.033

Review 9.  Probing the macromolecular organization of cells by electron tomography.

Authors:  Andreas Hoenger; J Richard McIntosh
Journal:  Curr Opin Cell Biol       Date:  2009-02       Impact factor: 8.382

10.  Effect of fringe-artifact correction on sub-tomogram averaging from Zernike phase-plate cryo-TEM.

Authors:  Gregory P Kishchenko; Radostin Danev; Rebecca Fisher; Jie He; Chyongere Hsieh; Michael Marko; Haixin Sui
Journal:  J Struct Biol       Date:  2015-07-22       Impact factor: 2.867

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