Literature DB >> 18075576

The molecular sociology of the cell.

Carol V Robinson1, Andrej Sali, Wolfgang Baumeister.   

Abstract

Proteomic studies have yielded detailed lists of the proteins present in a cell. Comparatively little is known, however, about how these proteins interact and are spatially arranged within the 'functional modules' of the cell: that is, the 'molecular sociology' of the cell. This gap is now being bridged by using emerging experimental techniques, such as mass spectrometry of complexes and single-particle cryo-electron microscopy, to complement traditional biochemical and biophysical methods. With the development of integrative computational methods to exploit the data obtained, such hybrid approaches will uncover the molecular architectures, and perhaps even atomic models, of many protein complexes. With these structures in hand, researchers will be poised to use cryo-electron tomography to view protein complexes in action within cells, providing unprecedented insights into protein-interaction networks.

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Year:  2007        PMID: 18075576     DOI: 10.1038/nature06523

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  178 in total

1.  A distance-weighted interaction map reveals a previously uncharacterized layer of the Bacillus subtilis spore coat.

Authors:  Peter T McKenney; Adam Driks; Haig A Eskandarian; Paul Grabowski; Jonathan Guberman; Katherine H Wang; Zemer Gitai; Patrick Eichenberger
Journal:  Curr Biol       Date:  2010-05-06       Impact factor: 10.834

2.  Macromolecular docking restrained by a small angle X-ray scattering profile.

Authors:  Dina Schneidman-Duhovny; Michal Hammel; Andrej Sali
Journal:  J Struct Biol       Date:  2010-10-12       Impact factor: 2.867

3.  An entirely specific type I A-kinase anchoring protein that can sequester two molecules of protein kinase A at mitochondria.

Authors:  Christopher K Means; Birgitte Lygren; Lorene K Langeberg; Ankur Jain; Rose E Dixon; Amanda L Vega; Matthew G Gold; Susanna Petrosyan; Susan S Taylor; Anne N Murphy; Taekjip Ha; Luis F Santana; Kjetil Tasken; John D Scott
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-14       Impact factor: 11.205

Review 4.  Nanobiochips.

Authors:  Ramūnas Valiokas
Journal:  Cell Mol Life Sci       Date:  2011-11-01       Impact factor: 9.261

5.  Ion mobility-mass spectrometry reveals conformational changes in charge reduced multiprotein complexes.

Authors:  Russell E Bornschein; Suk-Joon Hyung; Brandon T Ruotolo
Journal:  J Am Soc Mass Spectrom       Date:  2011-07-16       Impact factor: 3.109

6.  Topographic studies of the GroEL-GroES chaperonin complex by chemical cross-linking using diformyl ethynylbenzene: the power of high resolution electron transfer dissociation for determination of both peptide sequences and their attachment sites.

Authors:  Michael J Trnka; A L Burlingame
Journal:  Mol Cell Proteomics       Date:  2010-09-02       Impact factor: 5.911

Review 7.  The application of mass-spectrometry-based protein biomarker discovery to theragnostics.

Authors:  Jonathan M Street; James W Dear
Journal:  Br J Clin Pharmacol       Date:  2010-04       Impact factor: 4.335

8.  Maximum likelihood refinement of electron microscopy data with normalization errors.

Authors:  Sjors H W Scheres; Mikel Valle; Patricia Grob; Eva Nogales; José-María Carazo
Journal:  J Struct Biol       Date:  2009-02-21       Impact factor: 2.867

9.  Inferential optimization for simultaneous fitting of multiple components into a CryoEM map of their assembly.

Authors:  Keren Lasker; Maya Topf; Andrej Sali; Haim J Wolfson
Journal:  J Mol Biol       Date:  2009-02-20       Impact factor: 5.469

Review 10.  Evolution of a dynamic molecular switch.

Authors:  Susan S Taylor; Hiruy S Meharena; Alexandr P Kornev
Journal:  IUBMB Life       Date:  2019-05-06       Impact factor: 3.885

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