Literature DB >> 18066804

Solid-phase synthesis of modified RNAs containing amide-linked oligoribonucleosides at their 3'-end and their application to siRNA.

Reiko Iwase1, Takaaki Toyama, Kengo Nishimori.   

Abstract

siRNAs against luciferase mRNA were modified with amide-linked oligoribonucleosides (amide-linked RNA) at their 3 '-overhangs. Tm values of the modified siRNAs increased compared with that of the unmodified siRNA. These results indicate that the modified overhangs increase the thermodynamic stability of the siRNAs. The modified overhangs improved stability of siRNAs against degradation by nuclease S1 and 50% mouse plasma. Furthermore the modified siRNAs reduced the target gene expression in a similar manner to the unmodified siRNA in cultured cells. These results suggest that the overhang modifications are tolerated for the siRNA activity.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18066804     DOI: 10.1080/15257770701542389

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  12 in total

1.  Monomers for preparation of amide linked RNA: Synthesis of C3'-homologated nucleoside amino acids from d-xylose.

Authors:  Paul Tanui; Martin Kullberg; Ni Song; Yashodhan Chivate; Eriks Rozners
Journal:  Tetrahedron       Date:  2010-07-01       Impact factor: 2.457

2.  Concurrent Hydrogenation of Three Functional Groups Enables Synthesis of C3'-Homologated Nucleoside Amino Acids.

Authors:  Venubabu Kotikam; Eriks Rozners
Journal:  Org Lett       Date:  2017-07-21       Impact factor: 6.005

3.  Synthesis and Biological Activity of Short Interfering RNAs Having Several Consecutive Amide Internucleoside Linkages.

Authors:  Venubabu Kotikam; Julien A Viel; Eriks Rozners
Journal:  Chemistry       Date:  2019-12-17       Impact factor: 5.236

4.  Amides as excellent mimics of phosphate linkages in RNA.

Authors:  Chelliah Selvam; Siji Thomas; Jason Abbott; Scott D Kennedy; Eriks Rozners
Journal:  Angew Chem Int Ed Engl       Date:  2011-01-21       Impact factor: 15.336

5.  Synthesis, biophysical studies and RNA interference activity of RNA having three consecutive amide linkages.

Authors:  Paul Tanui; Scott D Kennedy; Benjamin D Lunstad; Amanda Haas; Devin Leake; Eriks Rozners
Journal:  Org Biomol Chem       Date:  2014-02-28       Impact factor: 3.876

6.  Interplay of structure, hydration and thermal stability in formacetal modified oligonucleotides: RNA may tolerate nonionic modifications better than DNA.

Authors:  Andrej Kolarovic; Emma Schweizer; Emily Greene; Mark Gironda; Pradeep S Pallan; Martin Egli; Eriks Rozners
Journal:  J Am Chem Soc       Date:  2009-10-21       Impact factor: 15.419

7.  Amide-Modified RNA: Using Protein Backbone to Modulate Function of Short Interfering RNAs.

Authors:  Venubabu Kotikam; Eriks Rozners
Journal:  Acc Chem Res       Date:  2020-07-13       Impact factor: 22.384

8.  Development of Therapeutic-Grade Small Interfering RNAs by Chemical Engineering.

Authors:  Jesper B Bramsen; Jørgen Kjems
Journal:  Front Genet       Date:  2012-08-20       Impact factor: 4.599

9.  Amides are excellent mimics of phosphate internucleoside linkages and are well tolerated in short interfering RNAs.

Authors:  Daniel Mutisya; Chelliah Selvam; Benjamin D Lunstad; Pradeep S Pallan; Amanda Haas; Devin Leake; Martin Egli; Eriks Rozners
Journal:  Nucleic Acids Res       Date:  2014-05-09       Impact factor: 16.971

10.  Amide linkages mimic phosphates in RNA interactions with proteins and are well tolerated in the guide strand of short interfering RNAs.

Authors:  Daniel Mutisya; Travis Hardcastle; Samwel K Cheruiyot; Pradeep S Pallan; Scott D Kennedy; Martin Egli; Melissa L Kelley; Anja van Brabant Smith; Eriks Rozners
Journal:  Nucleic Acids Res       Date:  2017-08-21       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.