Literature DB >> 18045725

Light transport in tissue by 3D Monte Carlo: influence of boundary voxelization.

T Binzoni1, T S Leung, R Giust, D Rüfenacht, A H Gandjbakhche.   

Abstract

Monte Carlo (MC) based simulations of photon transport in living tissues have become the "gold standard" technique in biomedical optics. Three-dimensional (3D) voxel-based images are the natural way to represent human (and animal) tissues. It is generally believed that the combination of 3D images and MC based algorithms allows one to produce the most realistic models of photon propagation. In the present work, it is shown that this approach may lead to large errors in the MC data due to the "roughness" of the geometrical boundaries generated by the presence of the voxels. In particular, the computed intensity of the light detected on the tissue surface of a simple cubic tissue phantom may display errors from -80% to 120%. It is also shown that these errors depend in a complex manner on optical and geometrical parameters such as the interoptode distance, scattering coefficient, refractive index, etc. and on the degree of voxelization ("roughness") of the boundaries. It is concluded that if one wants to perform reliable 3D Monte Carlo simulations on complex geometries, such as human brain, skin or trabecular bone, it is necessary to introduce boundary meshing techniques or other equivalent procedures in the MC code to eliminate the deleterious effect of voxelization.

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Year:  2007        PMID: 18045725     DOI: 10.1016/j.cmpb.2007.10.008

Source DB:  PubMed          Journal:  Comput Methods Programs Biomed        ISSN: 0169-2607            Impact factor:   5.428


  9 in total

1.  Hybrid mesh and voxel based Monte Carlo algorithm for accurate and efficient photon transport modeling in complex bio-tissues.

Authors:  Shijie Yan; Qianqian Fang
Journal:  Biomed Opt Express       Date:  2020-10-08       Impact factor: 3.732

2.  Dynamic optical absorption characteristics of blood after slow and fast heating.

Authors:  Hao Jia; Bin Chen; Dong Li
Journal:  Lasers Med Sci       Date:  2017-01-13       Impact factor: 3.161

3.  FullMonteCUDA: a fast, flexible, and accurate GPU-accelerated Monte Carlo simulator for light propagation in turbid media.

Authors:  Tanner Young-Schultz; Stephen Brown; Lothar Lilge; Vaughn Betz
Journal:  Biomed Opt Express       Date:  2019-08-21       Impact factor: 3.732

4.  A tetrahedron-based inhomogeneous Monte Carlo optical simulator.

Authors:  H Shen; G Wang
Journal:  Phys Med Biol       Date:  2010-01-20       Impact factor: 3.609

5.  Mesh-based Monte Carlo method using fast ray-tracing in Plücker coordinates.

Authors:  Qianqian Fang
Journal:  Biomed Opt Express       Date:  2010-07-15       Impact factor: 3.732

6.  Modeling voxel-based Monte Carlo light transport with curved and oblique boundary surfaces.

Authors:  Anh Phong Tran; Steven Jacques
Journal:  J Biomed Opt       Date:  2020-02       Impact factor: 3.170

7.  MCCL: an open-source software application for Monte Carlo simulations of radiative transport.

Authors:  Carole K Hayakawa; Lisa Malenfant; Janaka Ranasinghesagara; David J Cuccia; Jerome Spanier; Vasan Venugopalan
Journal:  J Biomed Opt       Date:  2022-04       Impact factor: 3.758

8.  Meshless Monte Carlo radiation transfer method for curved geometries using signed distance functions.

Authors:  Lewis McMillan; Graham D Bruce; Kishan Dholakia
Journal:  J Biomed Opt       Date:  2022-08       Impact factor: 3.758

9.  Mathematical modeling of the optimum pulse structure for safe and effective photo epilation using broadband pulsed light.

Authors:  Caerwyn Ash; Kelvin Donne; Gwenaelle Daniel; Godfrey Town; Marc Clement; Ronan Valentine
Journal:  J Appl Clin Med Phys       Date:  2012-09-06       Impact factor: 2.102

  9 in total

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