Literature DB >> 18044563

Probabilistic fiber tracking using particle filtering.

Fan Zhang1, Casey Goodlett, Edwin Hancock, Guido Gerig.   

Abstract

This paper presents a novel and fast probabilistic method for white matter fiber tracking from diffusion weighted MRI (DWI). We formulate fiber tracking on a nonlinear state space model which is able to capture both smoothness regularity of fibers and uncertainties of the local fiber orientations due to noise and partial volume effects. The global tracking model is implemented using particle filtering, which allows us to recursively compute the posterior distribution of the potential fibers. The fiber orientation distribution is theoretically formulated for prolate and oblate tensors separately. Fast and efficient sampling is realised using the von Mises-Fisher distribution on unit spheres. Given a seed point, the method is able to rapidly locate the global optimal fiber and also provide a connectivity map. The proposed method is demonstrated on a brain dataset.

Mesh:

Year:  2007        PMID: 18044563     DOI: 10.1007/978-3-540-75759-7_18

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  6 in total

1.  Two-tensor tractography using a constrained filter.

Authors:  James G Malcolm; Martha E Shenton; Yogesh Rathi
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

2.  Probabilistic white matter fiber tracking using particle filtering and von Mises-Fisher sampling.

Authors:  Fan Zhang; Edwin R Hancock; Casey Goodlett; Guido Gerig
Journal:  Med Image Anal       Date:  2008-06-05       Impact factor: 8.545

3.  Neural tractography using an unscented Kalman filter.

Authors:  James G Malcolm; Martha E Shenton; Yogesh Rathi
Journal:  Inf Process Med Imaging       Date:  2009

4.  Tensor kernels for simultaneous fiber model estimation and tractography.

Authors:  Yogesh Rathi; James G Malcolm; Oleg Michailovich; Carl-Fredrik Westin; Martha E Shenton; Sylvain Bouix
Journal:  Magn Reson Med       Date:  2010-07       Impact factor: 4.668

5.  Mitigating gyral bias in cortical tractography via asymmetric fiber orientation distributions.

Authors:  Ye Wu; Yoonmi Hong; Yuanjing Feng; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Anal       Date:  2019-09-13       Impact factor: 8.545

6.  Joint Multi-Fiber NODDI Parameter Estimation and Tractography Using the Unscented Information Filter.

Authors:  Chinthala P Reddy; Yogesh Rathi
Journal:  Front Neurosci       Date:  2016-04-20       Impact factor: 4.677

  6 in total

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