Literature DB >> 18044012

Modeling and simulation of hepatic drug disposition using a physiologically based, multi-agent in silico liver.

Li Yan1, Glen E P Ropella, Sunwoo Park, Michael S Roberts, C Anthony Hunt.   

Abstract

PURPOSE: Validate a physiologically based, mechanistic, in silico liver (ISL) for studying the hepatic disposition and metabolism of antipyrine, atenolol, labetalol, diltiazem, and sucrose administered alone or in combination.
MATERIALS AND METHODS: Autonomous software objects representing hepatic components such as metabolic enzymes, cells, and microarchitectural details were plugged together to form a functioning liver analogue. Microarchitecture features were represented separately from drug metabolizing functions. Each ISL component interacts uniquely with mobile objects. Outflow profiles were recorded and compared to wet-lab data. A single ISL structure was selected, parameterized, and held constant for all compounds. Parameters sensitive to drug-specific physicochemical properties were tuned so that ISL outflow profiles matched in situ outflow profiles.
RESULTS: ISL simulations were validated separately and together against in situ data and prior physiologically based pharmacokinetic (PBPK) predictions. The consequences of ISL parameter changes on outflow profiles were explored. Selected changes altered outflow profiles in ways consistent with knowledge of hepatic anatomy and physiology and drug physicochemical properties.
CONCLUSIONS: A synthetic, agent-oriented in silico liver has been developed and successfully validated, enabling us to posit that static and dynamic ISL mechanistic details, although abstract, map realistically to hepatic mechanistic details in PBPK simulations.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18044012     DOI: 10.1007/s11095-007-9494-y

Source DB:  PubMed          Journal:  Pharm Res        ISSN: 0724-8741            Impact factor:   4.200


  16 in total

1.  Structure-hepatic disposition relationships for cationic drugs in isolated perfused rat livers: transmembrane exchange and cytoplasmic binding process.

Authors:  D Y Hung; P Chang; M Weiss; M S Roberts
Journal:  J Pharmacol Exp Ther       Date:  2001-05       Impact factor: 4.030

2.  Modeling of hepatic elimination and organ distribution kinetics with the extended convection-dispersion model.

Authors:  M S Roberts; Y G Anissimov
Journal:  J Pharmacokinet Biopharm       Date:  1999-08

3.  Studies of intestinal drug transport using an in silico epithelio-mimetic device.

Authors:  Yu Liu; C Anthony Hunt
Journal:  Biosystems       Date:  2005-08-30       Impact factor: 1.973

Review 4.  An integrated approach to model hepatic drug clearance.

Authors:  Lichuan Liu; K Sandy Pang
Journal:  Eur J Pharm Sci       Date:  2006-05-22       Impact factor: 4.384

5.  Mechanistic study of the cellular interplay of transport and metabolism using the synthetic modeling method.

Authors:  Yu Liu; C Anthony Hunt
Journal:  Pharm Res       Date:  2006-01-31       Impact factor: 4.200

6.  Quantitative morphology of the sinusoids of the hepatic acinus. Quantimet analysis of rat liver.

Authors:  D L Miller; C S Zanolli; J J Gumucio
Journal:  Gastroenterology       Date:  1979-05       Impact factor: 22.682

7.  Cationic drug pharmacokinetics in diseased livers determined by fibrosis index, hepatic protein content, microsomal activity, and nature of drug.

Authors:  Daniel Y Hung; Ping Chang; Kee Cheung; Brett McWhinney; Paul P Masci; Michael Weiss; Michael S Roberts
Journal:  J Pharmacol Exp Ther       Date:  2002-06       Impact factor: 4.030

8.  Mechanisms for the uptake of cationic drugs by the liver: a study with tributylmethylammonium (TBuMA).

Authors:  H Steen; R Oosting; D K Meijer
Journal:  J Pharmacol Exp Ther       Date:  1991-08       Impact factor: 4.030

9.  Three-dimensional reconstruction of parenchymal units in the liver of the rat.

Authors:  H F Teutsch; D Schuerfeld; E Groezinger
Journal:  Hepatology       Date:  1999-02       Impact factor: 17.425

10.  An in silico transwell device for the study of drug transport and drug-drug interactions.

Authors:  Lana X Garmire; David G Garmire; C Anthony Hunt
Journal:  Pharm Res       Date:  2007-08-17       Impact factor: 4.580

View more
  16 in total

Review 1.  At the biological modeling and simulation frontier.

Authors:  C Anthony Hunt; Glen E P Ropella; Tai Ning Lam; Jonathan Tang; Sean H J Kim; Jesse A Engelberg; Shahab Sheikh-Bahaei
Journal:  Pharm Res       Date:  2009-09-09       Impact factor: 4.200

2.  Tissue-level modeling of xenobiotic metabolism in liver: An emerging tool for enabling clinical translational research.

Authors:  Marianthi G Lerapetritou; Panos G Georgopoulos; Charles M Roth; Loannis P Androulakis
Journal:  Clin Transl Sci       Date:  2009-06       Impact factor: 4.689

3.  Computational experiments reveal plausible mechanisms for changing patterns of hepatic zonation of xenobiotic clearance and hepatotoxicity.

Authors:  Shahab Sheikh-Bahaei; Jacquelyn J Maher; C Anthony Hunt
Journal:  J Theor Biol       Date:  2010-06-10       Impact factor: 2.691

4.  Cloud computing and validation of expandable in silico livers.

Authors:  Glen E P Ropella; C Anthony Hunt
Journal:  BMC Syst Biol       Date:  2010-12-03

Review 5.  Drug structure-transport relationships.

Authors:  Michael S Roberts
Journal:  J Pharmacokinet Pharmacodyn       Date:  2010-11-24       Impact factor: 2.745

6.  Heat Shock Protein 70 Expression is Increased in the Liver of Neonatal Intrauterine Growth Retardation Piglets.

Authors:  Wei Li; Xiang Zhong; Lili Zhang; Yuanxiao Wang; Tian Wang
Journal:  Asian-Australas J Anim Sci       Date:  2012-08       Impact factor: 2.509

7.  Toward modular biological models: defining analog modules based on referent physiological mechanisms.

Authors:  Brenden K Petersen; Glen E P Ropella; C Anthony Hunt
Journal:  BMC Syst Biol       Date:  2014-08-16

8.  A Liver-Centric Multiscale Modeling Framework for Xenobiotics.

Authors:  James P Sluka; Xiao Fu; Maciej Swat; Julio M Belmonte; Alin Cosmanescu; Sherry G Clendenon; John F Wambaugh; James A Glazier
Journal:  PLoS One       Date:  2016-09-16       Impact factor: 3.240

9.  Essential operating principles for tumor spheroid growth.

Authors:  Jesse A Engelberg; Glen E P Ropella; C Anthony Hunt
Journal:  BMC Syst Biol       Date:  2008-12-23

10.  Virtual Experiments Enable Exploring and Challenging Explanatory Mechanisms of Immune-Mediated P450 Down-Regulation.

Authors:  Brenden K Petersen; Glen E P Ropella; C Anthony Hunt
Journal:  PLoS One       Date:  2016-05-26       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.