Literature DB >> 18041270

A probabilistic model-based approach to consistent white matter tract segmentation.

Jonathan D Clayden1, Amos J Storkey, Mark E Bastin.   

Abstract

Since the invention of diffusion magnetic resonance imaging (dMRI), currently the only established method for studying white matter connectivity in a clinical environment, there has been a great deal of interest in the effects of various pathologies on the connectivity of the brain. As methods for in vivo tractography have been developed, it has become possible to track and segment specific white matter structures of interest for particular study. However, the consistency and reproducibility of tractography-based segmentation remain limited, and attempts to improve them have thus far typically involved the imposition of strong constraints on the tract reconstruction process itself. In this work we take a different approach, developing a formal probabilistic model for the relationships between comparable tracts in different scans, and then using it to choose a tract, a posteriori, which best matches a predefined reference tract for the structure of interest. We demonstrate that this method is able to significantly improve segmentation consistency without directly constraining the tractography algorithm.

Mesh:

Year:  2007        PMID: 18041270     DOI: 10.1109/TMI.2007.905826

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  25 in total

1.  Surface-based vertexwise analysis of morphometry and microstructural integrity for white matter tracts in diffusion tensor imaging: With application to the corpus callosum in Alzheimer's disease.

Authors:  Xiaoying Tang; Yuanyuan Qin; Wenzhen Zhu; Michael I Miller
Journal:  Hum Brain Mapp       Date:  2017-01-13       Impact factor: 5.038

2.  Quantifying the effects of normal ageing on white matter structure using unsupervised tract shape modelling.

Authors:  Mark E Bastin; Susana Muñoz Maniega; Karen J Ferguson; Laura J Brown; Joanna M Wardlaw; Alasdair M J MacLullich; Jonathan D Clayden
Journal:  Neuroimage       Date:  2010-02-17       Impact factor: 6.556

3.  A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI Analysis.

Authors:  Mahnaz Maddah; Lilla Zöllei; W Eric L Grimson; Carl-Fredrik Westin; William M Wells
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2008

4.  PopTract: population-based tractography.

Authors:  Pew-Thian Yap; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2011-05-12       Impact factor: 10.048

5.  Modeling of Anatomical Information in Clustering of White Matter Fiber Trajectories Using Dirichlet Distribution.

Authors:  Mahnaz Maddah; Lilla Zöllei; W Eric L Grimson; William M Wells
Journal:  Proc Workshop Math Methods Biomed Image Analysis       Date:  2008-07-15

6.  Along-tract statistics allow for enhanced tractography analysis.

Authors:  John B Colby; Lindsay Soderberg; Catherine Lebel; Ivo D Dinov; Paul M Thompson; Elizabeth R Sowell
Journal:  Neuroimage       Date:  2011-11-09       Impact factor: 6.556

7.  Automated white-matter tractography using a probabilistic diffusion tensor atlas: Application to temporal lobe epilepsy.

Authors:  Donald J Hagler; Mazyar E Ahmadi; Joshua Kuperman; Dominic Holland; Carrie R McDonald; Eric Halgren; Anders M Dale
Journal:  Hum Brain Mapp       Date:  2009-05       Impact factor: 5.038

8.  Cosine series representation of 3D curves and its application to white matter fiber bundles in diffusion tensor imaging.

Authors:  Moo K Chung; Nagesh Adluru; Jee Eun Lee; Mariana Lazar; Janet E Lainhart; Andrew L Alexander
Journal:  Stat Interface       Date:  2010       Impact factor: 0.582

Review 9.  Tractography: where do we go from here?

Authors:  Saad Jbabdi; Heidi Johansen-Berg
Journal:  Brain Connect       Date:  2011-08-30

10.  A general factor of brain white matter integrity predicts information processing speed in healthy older people.

Authors:  Lars Penke; Susana Muñoz Maniega; Catherine Murray; Alan J Gow; Maria C Valdés Hernández; Jonathan D Clayden; John M Starr; Joanna M Wardlaw; Mark E Bastin; Ian J Deary
Journal:  J Neurosci       Date:  2010-06-02       Impact factor: 6.167

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