Literature DB >> 18040742

A knowledge-anchored integrative image search and retrieval system.

Selnur Erdal1, Umit V Catalyurek, Philip R O Payne, Joel Saltz, Jyoti Kamal, Metin N Gurcan.   

Abstract

Clinical data that may be used in a secondary capacity to support research activities are regularly stored in three significantly different formats: (1) structured, codified data elements; (2) semi-structured or unstructured narrative text; and (3) multi-modal images. In this manuscript, we will describe the design of a computational system that is intended to support the ontology-anchored query and integration of such data types from multiple source systems. Additional features of the described system include (1) the use of Grid services-based electronic data interchange models to enable the use of our system in multi-site settings and (2) the use of a software framework intended to address both potential security and patient confidentiality concerns that arise when transmitting or otherwise manipulating potentially privileged personal health information. We will frame our discussion within the specific experimental context of the concept-oriented query and integration of correlated structured data, narrative text, and images for cancer research.

Entities:  

Mesh:

Year:  2007        PMID: 18040742      PMCID: PMC3043680          DOI: 10.1007/s10278-007-9086-8

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  36 in total

1.  Automatic structuring of radiology free-text reports.

Authors:  R K Taira; S G Soderland; R M Jakobovits
Journal:  Radiographics       Date:  2001 Jan-Feb       Impact factor: 5.333

2.  Use of internet technologies for data acquisition in large clinical trials.

Authors:  J Kuchenbecker; H B Dick; K Schmitz; W Behrens-Baumann
Journal:  Telemed J E Health       Date:  2001       Impact factor: 3.536

3.  Data, data, everywhere.

Authors:  D Butler
Journal:  Nature       Date:  2001 Dec 20-27       Impact factor: 49.962

4.  Heterogeneous database integration in biomedicine.

Authors:  W Sujansky
Journal:  J Biomed Inform       Date:  2001-08       Impact factor: 6.317

5.  Using technology to address recruitment issues in the clinical trial process.

Authors:  Lara Marks; Emmett Power
Journal:  Trends Biotechnol       Date:  2002-03       Impact factor: 19.536

6.  Lung nodule detection on thoracic computed tomography images: preliminary evaluation of a computer-aided diagnosis system.

Authors:  Metin N Gurcan; Berkman Sahiner; Nicholas Petrick; Heang-Ping Chan; Ella A Kazerooni; Philip N Cascade; Lubomir Hadjiiski
Journal:  Med Phys       Date:  2002-11       Impact factor: 4.071

7.  Research collaboratories: their potential for health behavior researchers.

Authors:  James M Craver; Robert S Gold
Journal:  Am J Health Behav       Date:  2002 Nov-Dec

8.  From data to knowledge through concept-oriented terminologies: experience with the Medical Entities Dictionary.

Authors:  J J Cimino
Journal:  J Am Med Inform Assoc       Date:  2000 May-Jun       Impact factor: 4.497

Review 9.  Conceptual knowledge acquisition in biomedicine: A methodological review.

Authors:  Philip R O Payne; Eneida A Mendonça; Stephen B Johnson; Justin B Starren
Journal:  J Biomed Inform       Date:  2007-03-27       Impact factor: 6.317

10.  Paradigm shifts in clinical trials enabled by information technology.

Authors:  R G Marks; M Conlon; S J Ruberg
Journal:  Stat Med       Date:  2001 Sep 15-30       Impact factor: 2.373

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  2 in total

1.  Workflow Lexicons in Healthcare: Validation of the SWIM Lexicon.

Authors:  Chris Meenan; Bradley Erickson; Nancy Knight; Jewel Fossett; Elizabeth Olsen; Prerna Mohod; Joseph Chen; Steve G Langer
Journal:  J Digit Imaging       Date:  2017-06       Impact factor: 4.056

Review 2.  Digital pathology and computational image analysis in nephropathology.

Authors:  Laura Barisoni; Kyle J Lafata; Stephen M Hewitt; Anant Madabhushi; Ulysses G J Balis
Journal:  Nat Rev Nephrol       Date:  2020-08-26       Impact factor: 28.314

  2 in total

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