Literature DB >> 18031280

The amazing diversity of cap-independent translation elements in the 3'-untranslated regions of plant viral RNAs.

W A Miller1, Z Wang, K Treder.   

Abstract

Many plant viral RNAs lack the 5'-cap structure that is required on all host mRNAs for interacting with essential translation initiation factors. Instead, uncapped viral RNAs take over the host translation machinery by harbouring sequences that functionally replace the 5'-cap. Recent reports reveal at least eight different classes of CITE (cap-independent translation element) located in the 3'-UTRs (untranslated regions) of various viruses. We describe how the structure and behaviour of each class of element differs from the other classes, suggesting that they recruit translation factors and, ultimately, the ribosome by diverse mechanisms. These results greatly expand our understanding of ways in which mRNAs can recruit ribosomes, and they provide insight into the regulation of virus gene expression.

Mesh:

Substances:

Year:  2007        PMID: 18031280      PMCID: PMC3081161          DOI: 10.1042/BST0351629

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  39 in total

1.  Cap-independent translational enhancement of turnip crinkle virus genomic and subgenomic RNAs.

Authors:  F Qu; T J Morris
Journal:  J Virol       Date:  2000-02       Impact factor: 5.103

2.  Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA.

Authors:  L Guo; E M Allen; W A Miller
Journal:  Mol Cell       Date:  2001-05       Impact factor: 17.970

3.  Plant translation initiation factors: it is not easy to be green.

Authors:  K S Browning
Journal:  Biochem Soc Trans       Date:  2004-08       Impact factor: 5.407

Review 4.  Alternative mechanisms of initiating translation of mammalian mRNAs.

Authors:  R J Jackson
Journal:  Biochem Soc Trans       Date:  2005-12       Impact factor: 5.407

Review 5.  Divergent IRES elements in invertebrates.

Authors:  Eric Jan
Journal:  Virus Res       Date:  2005-11-22       Impact factor: 3.303

6.  The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation.

Authors:  Krzysztof Treder; Elizabeth L Pettit Kneller; Edwards M Allen; Zhaohui Wang; Karen S Browning; W Allen Miller
Journal:  RNA       Date:  2007-11-19       Impact factor: 4.942

Review 7.  Translation initiation factors: a weak link in plant RNA virus infection.

Authors:  Christophe Robaglia; Carole Caranta
Journal:  Trends Plant Sci       Date:  2005-12-15       Impact factor: 18.313

8.  An eIF4E allele confers resistance to an uncapped and non-polyadenylated RNA virus in melon.

Authors:  Cristina Nieto; Monica Morales; Gisella Orjeda; Christian Clepet; Amparo Monfort; Benedicte Sturbois; Pere Puigdomènech; Michel Pitrat; Michel Caboche; Catherine Dogimont; Jordi Garcia-Mas; Miguel A Aranda; Abdelhafid Bendahmane
Journal:  Plant J       Date:  2006-10-05       Impact factor: 6.417

9.  The 5' and 3' extremities of the satellite tobacco necrosis virus translational enhancer domain contribute differentially to stimulation of translation.

Authors:  Rosalinde van Lipzig; Alexander P Gultyaev; Cornelis W A Pleij; Marc van Montagu; Marc Cornelissen; Frank Meulewaeter
Journal:  RNA       Date:  2002-02       Impact factor: 4.942

10.  Infectious cDNA transcripts of Maize necrotic streak virus: infectivity and translational characteristics.

Authors:  Kay Scheets; Margaret G Redinbaugh
Journal:  Virology       Date:  2006-03-20       Impact factor: 3.616

View more
  52 in total

1.  Identification of cis-acting elements in the 3'-untranslated region of the dengue virus type 2 RNA that modulate translation and replication.

Authors:  Mark Manzano; Erin D Reichert; Stephanie Polo; Barry Falgout; Wojciech Kasprzak; Bruce A Shapiro; Radhakrishnan Padmanabhan
Journal:  J Biol Chem       Date:  2011-04-22       Impact factor: 5.157

Review 2.  Translation initiation: variations in the mechanism can be anticipated.

Authors:  Naglis Malys; John E G McCarthy
Journal:  Cell Mol Life Sci       Date:  2010-11-13       Impact factor: 9.261

3.  Tombusvirus recruitment of host translational machinery via the 3' UTR.

Authors:  Beth L Nicholson; Baodong Wu; Irina Chevtchenko; K Andrew White
Journal:  RNA       Date:  2010-05-27       Impact factor: 4.942

4.  Poly(A)-binding protein facilitates translation of an uncapped/nonpolyadenylated viral RNA by binding to the 3' untranslated region.

Authors:  Hiro-Oki Iwakawa; Yuri Tajima; Takako Taniguchi; Masanori Kaido; Kazuyuki Mise; Yukihide Tomari; Hisaaki Taniguchi; Tetsuro Okuno
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

5.  The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation.

Authors:  Krzysztof Treder; Elizabeth L Pettit Kneller; Edwards M Allen; Zhaohui Wang; Karen S Browning; W Allen Miller
Journal:  RNA       Date:  2007-11-19       Impact factor: 4.942

6.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

7.  Evidence of pervasive biologically functional secondary structures within the genomes of eukaryotic single-stranded DNA viruses.

Authors:  Brejnev Muhizi Muhire; Michael Golden; Ben Murrell; Pierre Lefeuvre; Jean-Michel Lett; Alistair Gray; Art Y F Poon; Nobubelo Kwanele Ngandu; Yves Semegni; Emil Pavlov Tanov; Adérito Luis Monjane; Gordon William Harkins; Arvind Varsani; Dionne Natalie Shepherd; Darren Patrick Martin
Journal:  J Virol       Date:  2013-11-27       Impact factor: 5.103

8.  The 3' mRNA I-shaped structure of maize necrotic streak virus binds to eukaryotic translation factors for eIF4F-mediated translation initiation.

Authors:  Qiao Liu; Dixie J Goss
Journal:  J Biol Chem       Date:  2018-04-26       Impact factor: 5.157

9.  Solution structure of the cap-independent translational enhancer and ribosome-binding element in the 3' UTR of turnip crinkle virus.

Authors:  Xiaobing Zuo; Jinbu Wang; Ping Yu; Dan Eyler; Huan Xu; Mary R Starich; David M Tiede; Anne E Simon; Wojciech Kasprzak; Charles D Schwieters; Bruce A Shapiro; Yun-Xing Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-07       Impact factor: 11.205

10.  RNA-based regulation of transcription and translation of aureusvirus subgenomic mRNA1.

Authors:  Wei Xu; K Andrew White
Journal:  J Virol       Date:  2009-07-15       Impact factor: 5.103

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.