Literature DB >> 18028406

Evaluating candidate genes in common epilepsies and the nature of evidence.

Deb K Pal1, Lisa J Strug, David A Greenberg.   

Abstract

Very few genetic associations for idiopathic epilepsy have been replicated and this has tempered enthusiasm for the results of genetic studies in epilepsy. What are the reasons for lack of replication? While type 1 error, population stratification, and multiple testing have been discussed extensively, the importance of genetic heterogeneity has been relatively neglected. In the first part of this review, we explore the sources of genetic heterogeneity and their importance for epilepsy genetic studies. In the second part, we review alternatives to the simple law of replication, revisiting Bradford Hill's guidelines for evidence of causality. A coherence perspective is applied to three examples. We conclude that adopting the perspective of integrating coherent and consistent evidence from different experimental approaches is a more appropriate requirement for proceeding to functional studies.

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Year:  2007        PMID: 18028406      PMCID: PMC2322852          DOI: 10.1111/j.1528-1167.2007.01416.x

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   5.864


  44 in total

1.  Inter- and intrafamilial heterogeneity: effective sampling strategies and comparison of analysis methods.

Authors:  M Durner; D A Greenberg; S E Hodge
Journal:  Am J Hum Genet       Date:  1992-10       Impact factor: 11.025

2.  Examination of X chromosome markers in Rett syndrome: exclusion mapping with a novel variation on multilocus linkage analysis.

Authors:  K A Ellison; C P Fill; J Terwilliger; L J DeGennaro; A Martin-Gallardo; M Anvret; A K Percy; J Ott; H Zoghbi
Journal:  Am J Hum Genet       Date:  1992-02       Impact factor: 11.025

3.  Genetics of autoimmune thyroid disease: lack of evidence for linkage to HLA within families.

Authors:  S H Roman; D Greenberg; P Rubinstein; S Wallenstein; T F Davies
Journal:  J Clin Endocrinol Metab       Date:  1992-03       Impact factor: 5.958

4.  Refined mapping of the epilepsy susceptibility locus EJM1 on chromosome 6.

Authors:  T Sander; B Bockenkamp; T Hildmann; R Blasczyk; R Kretz; T F Wienker; A Volz; B Schmitz; G Beck-Mannagetta; O Riess; J T Epplen; D Janz; A Ziegler
Journal:  Neurology       Date:  1997-09       Impact factor: 9.910

5.  Absence epilepsy in tottering mutant mice is associated with calcium channel defects.

Authors:  C F Fletcher; C M Lutz; T N O'Sullivan; J D Shaughnessy; R Hawkes; W N Frankel; N G Copeland; N A Jenkins
Journal:  Cell       Date:  1996-11-15       Impact factor: 41.582

6.  Linkage analysis of "necessary" disease loci versus "susceptibility" loci.

Authors:  D A Greenberg
Journal:  Am J Hum Genet       Date:  1993-01       Impact factor: 11.025

7.  Autosomal dominant rolandic epilepsy and speech dyspraxia: a new syndrome with anticipation.

Authors:  I E Scheffer; L Jones; M Pozzebon; R A Howell; M M Saling; S F Berkovic
Journal:  Ann Neurol       Date:  1995-10       Impact factor: 10.422

8.  Localization of idiopathic generalized epilepsy on chromosome 6p in families of juvenile myoclonic epilepsy patients.

Authors:  M Durner; T Sander; D A Greenberg; K Johnson; G Beck-Mannagetta; D Janz
Journal:  Neurology       Date:  1991-10       Impact factor: 9.910

9.  Juvenile myoclonic epilepsy locus in chromosome 6p21.2-p11: linkage to convulsions and electroencephalography trait.

Authors:  A W Liu; A V Delgado-Escueta; J M Serratosa; M E Alonso; M T Medina; M N Gee; S Cordova; H Z Zhao; J M Spellman; J R Peek
Journal:  Am J Hum Genet       Date:  1995-08       Impact factor: 11.025

10.  Juvenile myoclonic epilepsy in chromosome 6p12-p11: locus heterogeneity and recombinations.

Authors:  A W Liu; A V Delgado-Escueta; M N Gee; J M Serratosa; Q W Zhang; M E Alonso; M T Medina; S Cordova; H Z Zhao; J M Spellman; F R Donnadieu; J R Peek; L J Treiman; R S Sparkes
Journal:  Am J Med Genet       Date:  1996-06-14
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  5 in total

Review 1.  Genetic evaluation and counseling for epilepsy.

Authors:  Deb K Pal; Amanda W Pong; Wendy K Chung
Journal:  Nat Rev Neurol       Date:  2010-07-20       Impact factor: 42.937

2.  Multiple subsampling of dense SNP data localizes disease genes with increased precision.

Authors:  William C L Stewart; Anna L Peljto; David A Greenberg
Journal:  Hum Hered       Date:  2009-12-18       Impact factor: 0.444

3.  Identification of a novel idiopathic epilepsy locus in Belgian Shepherd dogs.

Authors:  Eija H Seppälä; Lotta L E Koskinen; Christina H Gulløv; Päivi Jokinen; Peter Karlskov-Mortensen; Luciana Bergamasco; Izabella Baranowska Körberg; Sigitas Cizinauskas; Anita M Oberbauer; Mette Berendt; Merete Fredholm; Hannes Lohi
Journal:  PLoS One       Date:  2012-03-23       Impact factor: 3.240

Review 4.  Genetic susceptibility in Juvenile Myoclonic Epilepsy: Systematic review of genetic association studies.

Authors:  Bruna Priscila Dos Santos; Chiara Rachel Maciel Marinho; Thalita Ewellyn Batista Sales Marques; Layanne Kelly Gomes Angelo; Maísa Vieira da Silva Malta; Marcelo Duzzioni; Olagide Wagner de Castro; João Pereira Leite; Fabiano Timbó Barbosa; Daniel Leite Góes Gitaí
Journal:  PLoS One       Date:  2017-06-21       Impact factor: 3.240

5.  Revealing a brain network endophenotype in families with idiopathic generalised epilepsy.

Authors:  Fahmida A Chowdhury; Wessel Woldman; Thomas H B FitzGerald; Robert D C Elwes; Lina Nashef; John R Terry; Mark P Richardson
Journal:  PLoS One       Date:  2014-10-10       Impact factor: 3.240

  5 in total

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