Literature DB >> 18024500

Binding of anionic lipids to at least three nonannular sites on the potassium channel KcsA is required for channel opening.

Phedra Marius1, Michele Zagnoni, Mairi E Sandison, J Malcolm East, Hywel Morgan, Anthony G Lee.   

Abstract

In addition to the annular or boundary lipids that surround the transmembrane surface of the potassium channel KcsA from Streptomyces lividans, x-ray crystallographic studies have detected one anionic lipid molecule bound at each protein-protein interface in the homotetrameric structure, at sites referred to as nonannular sites. The binding constant for phosphatidylglycerol at the nonannular sites has been determined using fluorescence quenching methods with a mutant of KcsA lacking the normal three lipid-exposed Trp residues. Binding is weak, with a binding constant of 0.42 +/- 0.06 in units of mol fraction, implying that the nonannular sites will only be approximately 70% occupied in bilayers of 100% phosphatidylglycerol. However, the nonannular sites show high selectivity for anionic lipids over zwitterionic lipids, and it is suggested that a change in packing at the protein-protein interface leads to a closing of the nonannular binding site in the unbound state. Increasing the anionic lipid content of the membrane leads to a large increase in open channel probability, from approximately 2.5% in the presence of 25 mol % phosphatidylglycerol to approximately 62% in 100 mol % phosphatidylglycerol. The relationship between open channel probability and phosphatidylglycerol content shows cooperativity. The data are consistent with a model in which three or four of the four nonannular sites in the KcsA homotetramer have to be occupied by anionic lipid for the channel to open. The conductance of the open channel increases with increasing concentration of anionic lipid, an effect possibly due to effects of anionic lipid on the concentration of K(+) close to the membrane surface.

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Year:  2007        PMID: 18024500      PMCID: PMC2242745          DOI: 10.1529/biophysj.107.117507

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  32 in total

1.  Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution.

Authors:  Y Zhou; J H Morais-Cabral; A Kaufman; R MacKinnon
Journal:  Nature       Date:  2001-11-01       Impact factor: 49.962

2.  Opening the KcsA K+ channel: tryptophan scanning and complementation analysis lead to mutants with altered gating.

Authors:  Stacey N Irizarry; Esin Kutluay; Gabriele Drews; Sarah J Hart; Lise Heginbotham
Journal:  Biochemistry       Date:  2002-11-19       Impact factor: 3.162

3.  Penetration of lipid chains into transmembrane surfaces of membrane proteins: studies with MscL.

Authors:  Joanne Carney; J Malcolm East; Anthony G Lee
Journal:  Biophys J       Date:  2007-02-16       Impact factor: 4.033

4.  Nucleotides and phospholipids compete for binding to the C terminus of KATP channels.

Authors:  Gordon G MacGregor; Ke Dong; Carlos G Vanoye; LieQi Tang; Gerhard Giebisch; Steven C Hebert
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-05       Impact factor: 11.205

5.  Compromised ATP binding as a mechanism of phosphoinositide modulation of ATP-sensitive K+ channels.

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Journal:  FEBS Lett       Date:  2002-12-04       Impact factor: 4.124

6.  Amino acid distributions in integral membrane protein structures.

Authors:  M B Ulmschneider; M S Sansom
Journal:  Biochim Biophys Acta       Date:  2001-05-02

7.  The role of tryptophan residues in an integral membrane protein: diacylglycerol kinase.

Authors:  Elizabeth H Clark; J Malcolm East; Anthony G Lee
Journal:  Biochemistry       Date:  2003-09-23       Impact factor: 3.162

Review 8.  Lipid-protein interactions in biological membranes: a structural perspective.

Authors:  A G Lee
Journal:  Biochim Biophys Acta       Date:  2003-05-02

9.  Interactions of phospholipids with the potassium channel KcsA.

Authors:  Ian M Williamson; Simon J Alvis; J Malcolm East; Anthony G Lee
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

10.  Lipids in the structure, folding, and function of the KcsA K+ channel.

Authors:  Francis I Valiyaveetil; Yufeng Zhou; Roderick MacKinnon
Journal:  Biochemistry       Date:  2002-09-03       Impact factor: 3.162

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  69 in total

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Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

2.  Detailed examination of Mg2+ and pH sensitivity of human TRPM7 channels.

Authors:  Rikki Chokshi; Masayuki Matsushita; J Ashot Kozak
Journal:  Am J Physiol Cell Physiol       Date:  2012-02-01       Impact factor: 4.249

3.  Orientation and conformation of lipids in crystals of transmembrane proteins.

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Journal:  Eur Biophys J       Date:  2012-05-30       Impact factor: 1.733

4.  Interfacial Binding Sites for Cholesterol on Kir, Kv, K2P, and Related Potassium Channels.

Authors:  Anthony G Lee
Journal:  Biophys J       Date:  2020-06-04       Impact factor: 4.033

Review 5.  Helical membrane protein conformations and their environment.

Authors:  Timothy A Cross; Dylan T Murray; Anthony Watts
Journal:  Eur Biophys J       Date:  2013-09-01       Impact factor: 1.733

6.  Dual-mode phospholipid regulation of human inward rectifying potassium channels.

Authors:  Wayland W L Cheng; Nazzareno D'Avanzo; Declan A Doyle; Colin G Nichols
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

7.  Structure and function at the lipid-protein interface of a pentameric ligand-gated ion channel.

Authors:  Pramod Kumar; Gisela D Cymes; Claudio Grosman
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-08       Impact factor: 11.205

8.  Importance of lipid-pore loop interface for potassium channel structure and function.

Authors:  Elwin A W van der Cruijsen; Deepak Nand; Markus Weingarth; Alexander Prokofyev; Sönke Hornig; Abhishek Arun Cukkemane; Alexandre M J J Bonvin; Stefan Becker; Raymond E Hulse; Eduardo Perozo; Olaf Pongs; Marc Baldus
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-23       Impact factor: 11.205

9.  The selectivity of K+ ion channels: testing the hypotheses.

Authors:  Philip W Fowler; Kaihsu Tai; Mark S P Sansom
Journal:  Biophys J       Date:  2008-09-12       Impact factor: 4.033

10.  Double bilayers and transmembrane gradients: a molecular dynamics study of a highly charged peptide.

Authors:  Elizabeth J Denning; Thomas B Woolf
Journal:  Biophys J       Date:  2008-06-27       Impact factor: 4.033

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